Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00753 ATGGTGCAGCAAAGGGTGAAAGTTGTTGTTGCTTCTTCCTCTAACTCTTCTTCTACAGTATCATCCAAGAAATATGACATTTTTCTAAGCTTCGGAGGTGAAGACACGCGCATGAACTTCACAAGCCTTCTATATGATGCTTTGAATGAAGCGAAAATCGTAACCAAATGGAAAGCTGCTCTCACTGAAGCAACCAATTTAGCTGGGACTGAGTCTGAATTCCTTAAGGACATTGTTCAAGATATTTTGCGACAATTGGCTCCTACGTACCCAAACCAATTTAAAAGACTAGTTGGAATTGAGAAAAGTTATGAAGAAATTGAATCATTACTAAAAATTTGGTCAAGTGAAGTTATAACGCTTGGAATATGGGGCATGGGTGGCATTGATGATGTGTCTACCCCAGAGCAATTAGAAAAACTAGTTGCAGGATATGATTTCTTGGGAGCAGGAAGTAGAGTCATTGTTACAACTAGAGATAAGCAGATACTTAGCACAGTTGATGAAATATACCCAGTTGAGGAATTGAACTCTGATCACTCTCTTCAGCTTTTCTGTTTGACTGCTTTTGGAGAAAAACAACCTAAACACGGATATGAAGATCTATCAAGAAGAGTAATTTTCTATTGCAAAGGTGTTCCTTTGGCTTTAAAGGTTTTGGGTGCAAATCTTCGTAACAGAAATGAAAAAGCATGGGAATGTGAATTGAGAAAACTTGAAAAGATTCCAAATACGAAAATTCATAATGGAACTGATGTTGTTGAGGGCATAATTTTATATTTGCATACATTAAATGCAGATCTACATTTAAGCTCTAATTCCTTTGCAAAGATGAGTAACATGAGATTTCTTATAATCTATGAAGAGTACGGGTGGAGTATATTTAATGTGTACCTTCCTAATGGTCTTATGTCATTATCTGGTAAATTGATGTACCTTCACTGGGATAGATGCTGTCATGAGTCTTTGTCACCTAACTTTTGTGCTGAACAGCTTGTAGAGCTTCACATGTGTTATAGCAATCTTAAAAAGCTTTGGGATGGGGTTCAGAATCTTTTGAATTTAAAGACAGTTGACCTTTCATACTCCCAAAACCTGATTGAGATTCCAGACTTATCCAAGGCAGAAAAACTTGAAAAAGTTTCTCTTGTTTACTGTGAAAGCTTGAGTCAGCTCCATCCATCCATGTTATCTCTTCCCAAGCTTACATATTTGGATTTAAGCAACTGCAGAAAGATTGGAAGCCTTAAAAGCAATGTTCATTCAAAATCTCTCTGTGTACTGAGAGTAGAGGGTTGTTCATCGCTCAAGGAATTTTCAATGACATCAGAGAAAATAAGAGAATTGGACTTTTCAGACATAGCTTTATGTGTATTGTCCCCATCAATTGATCACTTATTGTGTTTAGAAGAGTTAGACCTAAGTCGAACTAATGTTGAGAGCTTGCCTGCAAACATCAAAAACCTTTCAATGCTAACAAGTCTTCGAGCTTCCACCATCCCTAAGAGAGCTTCACTTGAATGGTTGTCAGAAATTCCACCATCCCTGAGAGAACTTTATTTAAGTGGCTGCTGGATGCTCGTGTCTCTGTCGGAGCTTCCACCATCCCTGAGGAAGCTTCGTTTAACTAATTGCCGGAAACTCATGTCTCTACCGGAGCTTCTGCCATCCCTAAGAGAGCTTCCATTAAATAATTGCTGGAAATTCGTGTCTCTTCCGAAGCTTCCATCATCCCTGATGAAGCTTTATTTAAATGATTGCCGGAAACTCGTGTCTCTGCCAGTGCTTCCACCATCCCTGATAAAGCTTTATTTAAATGATTGCTGGAAACTCGTGTCTCTGCCAGAGCTTCCACCATCCCTGATAAAGCTTTATTTAAATGATTGCCGGAAACTCGTGTCTCTGCCAGAGCTTCCATCGTCCCTGAGAGAGCTTTCTTTAAATGATTGCTCGAAGCTCATGTCTCTGCCGAAGCTTCCACCATCAGTGAGAAAGGTGAGCGCCTTTAACTGCATTTCTCTGGATACAAACATCACACAAGGGCTAGTGTTAGAGCACATGTCTCAGAGTCGCATACCCTACTTACATGAACAATATCTAAGTAATCCTAAGTTTCATGGTCTTGGTTATTTCATCTTCACGGGAGACCATGTCACCAATGAGTGTGGGTTTAAGACATCCGAGAGTTCAATAACTATTTCTTATCTTCCCAAATCTGATTTTTTGGGTTTCATTTGTTGCATCCTTTTTTCTGGAAAAGGAGATTTGGTTGTTTCGAACGATGATCGTCGGAAAGAAGATGATGTTTCGGATGATGATGATGAAGTTTGGGAAGATGATGTTTCAGATTGCTATGATAATTGGAACGCTGATCTTTCGATTTATATCAATCCAGATGGCAAGCATGTTCACTCGGAAAACATTTTAATGGGATGCCCTGACAGTTTCGTTTCAAATCACGTGTTATTTTCCTATGTTGACATTTGCCGATTTGAAAGAATAAGTGAAGTGAATGATCAACTCAGCAACATATCATTTAAATTTGAATTTGACTTCCTTGAAGAGAGGATAAAAGGGTGTGGGATCTTCCCAGTATATGCCACAACATCAGGGTTGAAGTTGGTTAATTGCTGTACCAAGGTTGGACATGATCAAGGGTGTGGGGTCTTCTCAGTATCTTTATCAGCATTGGGGTTGAAACTTCTTGAAGGGGAATCAATGGTTCAAATCTCTGATAATGAATCACAGGCCTCAAATAATGAAAATGAAGATGACTGGGAACAACTTCCTGCATCCAAGAGGCAGAGGACTTCACCAGATAATCTTGGTGGAGAATGTTCAGAATCCTTGACCACTGTAAATGAGTTAGATCAAGCTCTGATGGTAATGGATTTGATGACTCAAAATTAA 2910 0.3911 MVQQRVKVVVASSSNSSSTVSSKKYDIFLSFGGEDTRMNFTSLLYDALNEAKIVTKWKAALTEATNLAGTESEFLKDIVQDILRQLAPTYPNQFKRLVGIEKSYEEIESLLKIWSSEVITLGIWGMGGIDDVSTPEQLEKLVAGYDFLGAGSRVIVTTRDKQILSTVDEIYPVEELNSDHSLQLFCLTAFGEKQPKHGYEDLSRRVIFYCKGVPLALKVLGANLRNRNEKAWECELRKLEKIPNTKIHNGTDVVEGIILYLHTLNADLHLSSNSFAKMSNMRFLIIYEEYGWSIFNVYLPNGLMSLSGKLMYLHWDRCCHESLSPNFCAEQLVELHMCYSNLKKLWDGVQNLLNLKTVDLSYSQNLIEIPDLSKAEKLEKVSLVYCESLSQLHPSMLSLPKLTYLDLSNCRKIGSLKSNVHSKSLCVLRVEGCSSLKEFSMTSEKIRELDFSDIALCVLSPSIDHLLCLEELDLSRTNVESLPANIKNLSMLTSLRASTIPKRASLEWLSEIPPSLRELYLSGCWMLVSLSELPPSLRKLRLTNCRKLMSLPELLPSLRELPLNNCWKFVSLPKLPSSLMKLYLNDCRKLVSLPVLPPSLIKLYLNDCWKLVSLPELPPSLIKLYLNDCRKLVSLPELPSSLRELSLNDCSKLMSLPKLPPSVRKVSAFNCISLDTNITQGLVLEHMSQSRIPYLHEQYLSNPKFHGLGYFIFTGDHVTNECGFKTSESSITISYLPKSDFLGFICCILFSGKGDLVVSNDDRRKEDDVSDDDDEVWEDDVSDCYDNWNADLSIYINPDGKHVHSENILMGCPDSFVSNHVLFSYVDICRFERISEVNDQLSNISFKFEFDFLEERIKGCGIFPVYATTSGLKLVNCCTKVGHDQGCGVFSVSLSALGLKLLEGESMVQISDNESQASNNENEDDWEQLPASKRQRTSPDNLGGECSESLTTVNELDQALMVMDLMTQN 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00753 969 MobiDBLite consensus disorder prediction 912 947 - -
Pumo8g00753 969 MobiDBLite consensus disorder prediction 932 947 - -
Pumo8g00753 969 Pfam NB-ARC domain 129 241 IPR002182 GO:0043531
Pumo8g00753 969 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 251 442 IPR044974 GO:0006952
Pumo8g00753 969 Gene3D Ribonuclease Inhibitor 507 705 IPR032675 -
Pumo8g00753 969 SMART LRR_bac_2 597 617 - -
Pumo8g00753 969 SMART LRR_bac_2 576 596 - -
Pumo8g00753 969 SMART LRR_bac_2 618 638 - -
Pumo8g00753 969 SMART LRR_bac_2 639 659 - -
Pumo8g00753 969 SMART LRR_bac_2 513 533 - -
Pumo8g00753 969 SMART LRR_bac_2 534 554 - -
Pumo8g00753 969 Gene3D - 175 254 IPR042197 -
Pumo8g00753 969 Pfam Leucine Rich Repeat 331 350 IPR011713 -
Pumo8g00753 969 SUPERFAMILY L domain-like 265 615 - -
Pumo8g00753 969 Gene3D - 3 79 IPR035897 -
Pumo8g00753 969 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 249 IPR027417 -
Pumo8g00753 969 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 56 IPR035897 -
Pumo8g00753 969 Gene3D Ribonuclease Inhibitor 329 506 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00753 Pumo-Chr8 29666621 29671182 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00753 250 562 WRKY Transcription Factor Family AT4G12020 34.161 1.90e-30 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00753 - - ccaj:109805276 494.967