Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00740 ATGAGTGTTCACGATAGAAATGTGAATGTTGTTCAGTGCAGTGATGATGTGAACGACGTTCACGGCGGCGGTGATGTGGAAGCTCCTCCAAAAGCTACAACAATGGCCTCAAGCCAGGGTTGGACATCGAAGCAGAACAAAAGATTTGAGAATGCCCTTGCCATCTTCGACAAGGACACCCCAGATAGGTGGCACACGGTGGCCAGGGCCGTAGGAGGAAAAACGGTGGAAGAAGTGAAGAGGCATTATGAGAAGCTCGTGGAAGATGTGAAGCAGATTGAGGAAGGTCACGTGCCCCTGCCCAATTACCGAAGTGCTGCAACTATGGGAAGCAGCATCAGAGGTTACGGTTACATGGATGAAGAAACCAGATACCAACGTTCCAATGATAACCTTCTGGAGGAGCTTCCACATCACCGCCGCCGTGAAGGTCGTTCACATCGTCACCGCACTGAACAACATTCACATTTCCGCCGTGAACACTCATCGTTTTGTGCGAAAGGGGAAGTGGTTGAATGA 519 0.5029 MSVHDRNVNVVQCSDDVNDVHGGGDVEAPPKATTMASSQGWTSKQNKRFENALAIFDKDTPDRWHTVARAVGGKTVEEVKRHYEKLVEDVKQIEEGHVPLPNYRSAATMGSSIRGYGYMDEETRYQRSNDNLLEELPHHRRREGRSHRHRTEQHSHFRREHSSFCAKGEVVE 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00740 172 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 35 109 IPR044636 GO:0003700
Pumo8g00740 172 SMART sant 37 89 IPR001005 -
Pumo8g00740 172 FunFam Transcription factor SRM1 33 100 - -
Pumo8g00740 172 Gene3D - 32 100 - -
Pumo8g00740 172 ProSiteProfiles SANT domain profile. 36 91 IPR017884 -
Pumo8g00740 172 Coils Coil 76 96 - -
Pumo8g00740 172 CDD SANT 41 87 IPR001005 -
Pumo8g00740 172 ProSiteProfiles Myb-like domain profile. 41 87 IPR001005 -
Pumo8g00740 172 MobiDBLite consensus disorder prediction 15 43 - -
Pumo8g00740 172 SUPERFAMILY Homeodomain-like 39 94 IPR009057 -
Pumo8g00740 172 MobiDBLite consensus disorder prediction 135 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00740 Pumo-Chr8 29124546 29128419 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo8g00740 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00740 - - vra:106761704 167.548