Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00737 ATGGTATTGGTTAAAGGGACGAAACTCACCCCCCCAATCAGTTTGAACTTCTTTAATTTTGTAGCTAAGTTGAAGTTCAACCAGACTTTTAAACCGTTTGAAGATATATTCAGAGTTTCTTGTCGTTCCTTTCTGCGCAGCCTCGGCGTCGTCGTCGAAGCAATCGTTGTTTCATTTGTGGCAGAAGACGTTAGTGAAGGTGCTGTTCGTGGCGTTGAACCAGAACGTGGAGCCGCTCGTACACGTGGAACCAGAAGGTGCTGTTCAGACAACATGGGTTACGATTCGGGTAGCCCCTCGCGAGATGGGAGGGACGAAGATGATGAAGAAGAATATGAGGAGTCCGGCAAGGGTAATCGTTTTCTTGGGTTCATGTTTGGAAATGTAGATAGTTCTGGTGATCTCGATGTTGATTATCTTGACGAGGATGCAAAGGAACATCTTTCTGCATTAGCTGATAAGCTGGGTCCATCACTGACAGATATAGATGTGTCAGGAAAATCACCACCAACACCACGTGACCTTGTTGAACAAGACTGTGATGAAAAAGATGAAGATGCAGTTGATTATGAAGATATTGATGAAGAGTATGATGGTCCAGAGACAGAAGCTGCCAATGAAGAGGACTATTTATTGCCAAAAAAGGAATTTGTCTCTGCTGAAGCCTCTGTATGTTTGGAGTCCAAAGCTTCTGTCTTTGATGATGAAAATTATGATGAAGAATCTGAAAAGGAGCAAGACTTTGTGAATGATGATTCTAAAGTTGATAACATCTCTTTAGCTGGGGAACAGGAAGAGAGTTTTGTAGATGCATCTAAAGAAGAGAGTGCTCTTGAACATGAATTACATGTTAACTCACTGCAGACTGAAGAGTTGGACACTGATGTACAAAAACTTGAGGCCCAAAAGGTCTATGGCTATGCATTGCCTGTTTTATGTGTGGAAGATGGTTTAGAAATTTTACGATTCTCTGAAATCTTTGGCATTCATGAACCTCTCAGAAAGGGAAAAAAGAGAGAGCATTGGCATTCCATTCCTAGAGATAGATACAAGTCTTTGGATTTAACTGATGATATTGTAGAAGAGGATGAAGAGGAATTCCTCAAGGGCTTCTCCCTGAGTTTCTCACTTACTAAACAAGTTTGTGTAGTTCATAATGACGTATCAGAAAGCAATGATGTTGACTTGGAGTTTCGAAAATTTGGATTTCTTCATGCGGATGCCTCAGTGGCCAGGAAAGATGATCAACAACTGAAGGACTCGTGTCATAGTGCTGAACCAATGAAAGGGGATTTTGCAGAAGATCATTCCTGCAAAGGTCATCCTTTCATGTTGGCCAACTTTTATCCTGTTGACCAGCAAGACTGGGAAGATGAAATCCTATGGGGCAATTCTCCTGTTCCAAGTAATAATAATGTTGAAAGCTGTGAAATTTCCGGACCTCAGTTGGGAGCTTCTGGTGGCAGTGAAATAGAAATTGAAAGTGGGATCCAGAATCTTCAGATGGAGCCCCAGAAGATACTGGAGGATAAATATCATAACATTTTCATGTGCAACTCTCCTGTCTCGTTGGAGCCCTTTGGCTCAAGGGATTCTTCTGGAGCTAAGACCAGTTTAATATCCAGAAGTCTATTTCATCCCCAACTTTTAAGGCTAGAATCCAAATCTGAAACGGATAATTCTAGTCTTGCAGATGGAAGAAAGGCAGAGATATCTAAGCATAATCAAAGTGGTCAAGTAAAGTGTTTTACCAAGGTTATATCACAAAACAGAGACATGATGGAGGGTTCCTGGATAGACAAGATAATATGGGAGGAGCTTGATCAGCCTGCGGTGAAACCAAGGCTTATCTTTGATCTGCAGGATGATCAAATGCACTTTGAAGTTTTAGACAGCAAGGACGGTACACATCTTCGCCTTCATGGTGGGGCTATGATTATAACTCGTTCATTAAAATCAAGCAGTGGGGACTCTTCTGAGCTACTGGGACATGGAAGTCAATATGGATGGCGATATGTTGCTAATGACAAACATTATTCAAACTGTAAAACTTCTCAGCAGCTTAAATCAAATTCTAAAAATCGCTCAGCTCATGGTGTCAAAGTCTTTCACTCACAACCTGCACTGAAGCTGCAGACGATGAAATTGAAGTTGAGCAATAAAGATATTGCAAATTTTCATCGGCCGAAAGCATTATGGTATCCTCATGACAATGAGGTGGCTGTCAAAGAACAAGGGAAATTGCCAACACTAGGACCCATGAAAATTATTATTAAGAGCTTGGGTGGCAAGGGGAGTAAACTGCATGTCGATGCTGAAGAAACTCTCTCTTCTGTTAAAGCAAAAGCTTCCAGAAAGCTAGATTTTAAGGCATCAGAAACAGTGAAAATATTTTATTTAGGGAGGGAGCTTGAAGATCACAAATCACTTGCTGCACAAAATGTTCAACCAAACTCCTTGTTACATCTTGTTCGTACAAAGATACATTTGTGGCCAAAAGCACAAAAGGTTTCTGGTGAGAACAAATCGTTGCGTCCTCCAGGAGCATTCAAGAAAAAGTCTGATCTGTCTGTAAAAGATGGACATGTTTTTCTGATGGAGTATTGTGAAGAAAGGCCTTTACTTTTGAGCAATGTTGGAATGGGTGCAAGACTTTGTACATACTATAAAAAATGTTCACCGGATGACCAATCTGGCTCCTTATTACGCAACATGGATAGTAGCTTGGGGCACATTATTTCTCTGAATCCTGCTGATAAATCTCCTTTCCTTGGAGATTTAAAACCTGGTTGCAGTCAGTTGTCACTTGAGACAAATATGTATAGAGCACCCATATTTCCTCATAAAGTTCCATTAACTGACTACCTGCTGGTTCGTTCATCAAAGGGAAAGCTATCATTAAGGCGAATTGATAAAATTAATGTTGTCGGACAACAGGAGCCTCTAATGGAGGTATTATCACCTGGAAGTAAAAATCTTAAGACTTACATGATGAACAGGCTATTGGTACACATGTGCCGTGAATTTCAAGCAGCAGAGAAGCGGCACTTGCCTCCTTATATCTGTATTGATGAATTTCTCTCACAGTTTCCTTACCAATCAGAAGCATCATTCCGTAAGAGAATCAAGGAATATGCCAATTTACAGAGGGGAACAAATGGACAGTCAATTTTGGTTAAAAAGCGAAATTTTCGCATTTGGTCAGAGGATGAATTGAGAAAAATGGTCACACCAGAGCTTGTTTGTGCCTATGAAAGCATGCAAGCTGGCCTCTACCGTCTAAAACATTTAGGAATAACTGAAACACACCCTACAAATATTTCATCTGCAATGAGTCAGCTTCCTGATGAAGCAATAGCATTGGCTGCTGCATCACACATTGAGAGGGAACAGCAGATTACCCCTTGGAACTTGAGTAGCAATTTTGTTGCTTGTACAAGCCAGGGTAAGGAAAATATTGAACGAATGGAAATTAATGGTGTTGGTGATCCATCTGGTCGTGGCATGGGTTTTTGCTATGCTCGGTTACCTCCAAAGCCACCAGGGTCTAGTGCAATGGTGAAGAAGACAGCGACTGCTAACCACGGAAGTTCTACTGTTACTGGTACAGATGCTGATCTACGTAGATTAAGCATGGAGGCTGCACGAGAGGTTCTTCTCAAGTTCAATGTTCCCGAGGAAGTCATTGCAAAACAAACTAAGAGGCAACGCATTGCTATGATACGTAAACTTTCAAGTGAGCAAGCTGCATCTGGGGTTAAGGTTGATCCGACAACTATCAGCAAATATGCCCGTGGTCAGCGAATGTCCTTTCTTCAGTTACAGCAGCACACCAGAGAGAAATGCCAGGAGATTTGGGATCGTCAAGTTCAGTGTCTGTCAGCTGTAAATGGTGATGAAAATGAGAGTGATTCAGAAGGGAATAGTGATCTGGATTCTTTTGCTGGAGATCTGGAAAATTTACTTGATGCTGAGGAGTGTGAAGAGGGTACCAATGACTTAAAACATGATAAGGGAGATGGTGTTAAGGGTCTTAAAATGAGAAGACGCCCAACTTTGGCTCAGGCAGAGGAGGAAATAGAAGATGAAGTAGCTGAGGCTGCTGAATTATGCAGGTTGCTTATGGATGATGATGAAGCTGACAGGAAGAAAAGGAAGAAAGCTAAAGTTATGGTGGAAGAAGCAAGATTGGTACCAAAGATGCAATCAAAATTTTCCTTTGGCAATGCTGAACAAGTTAAGCAAATAACAAATACTTTACAATCAGATGGAACTAATCCCTTGAAAGAGGATGTGATCACAGATCTTAGGGAGGAGGAAAAATTTCCTGTTAGAAAAAGCAAATCAAAGAAGGTCAATAAAGCCAAGAAGAATGATAGTACACCTTTTAGTCTTCCCAATAAAAAAATCAAATTGAATATTGGAGAAGGAATTAATATGCCTCCTGAAATTAACTTTGATTTATGTCTGGAGAACCAGGTGTTTAAGGAGAAAAAACCATTAAGGGAAATTTTTGTTTGTGGATCCTGTGGTCAGCCTGGGCACATGCAGACAAACAAAAACTGTCCAAAATATGGTGAAGATCTCGAAACTCAACTTGAATCTACAGATATGGAAAAATCATCTGGAAAATTCAGCTTTGTGGATCCCTCTAGTCACTCCCAGCATAAGGCCCCCACCAAAAAGGCAATGTCAAAAAGCGCAACAAAAATTGCTCCTGTTGACAATTCAACAAAAATTCCACTGAAATTGAAATGTGGCTCCACAGAGAAATCTTCTGATAAACCTGCAATAGAAACCCTGCAGAATTCTGACAAGCCAGTCACTTCTGACTCAGAAACTGCAAAATTTGCTAAGGTTAATAAGATAATTATTCCCAACAAAGTGAAACCAGATGATATGCAGGCTGAATCTCGTAAGCATGCTATTGTTATACGACCTCCTACTGATTCAGGTAGACGTCAGGTTGATTCTCATAAGTTCCCAATTAAAATATGCCCGCCAACAGAAATAGATAAGGAGCAAAGTCACAAAAAGATTGTTATAAAACGTACGAAGGAGGTTATTGATCTGGAACTGGACAGTCCTGGTGGAAACACAGGACTTCAACACAGAAAAACTAAAGGAATTGTTGAAATGTCGAATTTCGAGAAACAAAAAAAACAGGAGACCATGTCTGGAACTGAAGGTTTTGTAAAATTGAACACTAGGGAGCACAGAAGGTGGGAAGAGCAAGAGAAACGGAGAAATGATGCAAGGCTTCAAGAAGAAGACAGAGCAAGGAGGCATCACAAAGAAGAAATCAGGATGCTCAAAGAGCAAGAAAGGTTAGACGAGGAGGATGAAGAATGGCAAAAAGCTAAGAAAAAAAAGAAGAAAAATCCTTTTTTAAGAGATGAGTATTTAGATGACCCCAGAGTAAGAAGACATGATAAGAGAATGCTAGAAAGAGACCGGAGTGGAAAAAGGAGGTCTGTTGCTGAGTTAGGAAAGATTGGTGCAGATTATATGCCGCCAACAAAACGGCGAAGAGGGGGAGGGGGAGAGGTTGCTTTGGCAAATATCTTGGAGAGCGTTGTGGACACCATTGTGAAAGATAGGTACGATCTGTCATATCTTTTCTTGAAACCGGTGTCGAAGAAGGCGGCTCCTGACTACCTGGACATTATAGAGAGGCCTATGGATCTTTCCAGAATCAGGGAGAGGGTACGGAATATGGAGTACAAGAGTCGAGAAGATTTCAGGCATGATATCTGGCAGATTACTTACAATGCACATAAATATAACGACGGGCGAAATCCAGGAATTCCTGCCCTTGCAGATATGCTTTTGGAATATTGTGATCACTTGTTGAATGAGAATGACGATGGCCTCACTGAAGCAGAAGCTGGCATTGAAATTAGAGATTTCTAA 5913 0.4094 MVLVKGTKLTPPISLNFFNFVAKLKFNQTFKPFEDIFRVSCRSFLRSLGVVVEAIVVSFVAEDVSEGAVRGVEPERGAARTRGTRRCCSDNMGYDSGSPSRDGRDEDDEEEYEESGKGNRFLGFMFGNVDSSGDLDVDYLDEDAKEHLSALADKLGPSLTDIDVSGKSPPTPRDLVEQDCDEKDEDAVDYEDIDEEYDGPETEAANEEDYLLPKKEFVSAEASVCLESKASVFDDENYDEESEKEQDFVNDDSKVDNISLAGEQEESFVDASKEESALEHELHVNSLQTEELDTDVQKLEAQKVYGYALPVLCVEDGLEILRFSEIFGIHEPLRKGKKREHWHSIPRDRYKSLDLTDDIVEEDEEEFLKGFSLSFSLTKQVCVVHNDVSESNDVDLEFRKFGFLHADASVARKDDQQLKDSCHSAEPMKGDFAEDHSCKGHPFMLANFYPVDQQDWEDEILWGNSPVPSNNNVESCEISGPQLGASGGSEIEIESGIQNLQMEPQKILEDKYHNIFMCNSPVSLEPFGSRDSSGAKTSLISRSLFHPQLLRLESKSETDNSSLADGRKAEISKHNQSGQVKCFTKVISQNRDMMEGSWIDKIIWEELDQPAVKPRLIFDLQDDQMHFEVLDSKDGTHLRLHGGAMIITRSLKSSSGDSSELLGHGSQYGWRYVANDKHYSNCKTSQQLKSNSKNRSAHGVKVFHSQPALKLQTMKLKLSNKDIANFHRPKALWYPHDNEVAVKEQGKLPTLGPMKIIIKSLGGKGSKLHVDAEETLSSVKAKASRKLDFKASETVKIFYLGRELEDHKSLAAQNVQPNSLLHLVRTKIHLWPKAQKVSGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNVGMGARLCTYYKKCSPDDQSGSLLRNMDSSLGHIISLNPADKSPFLGDLKPGCSQLSLETNMYRAPIFPHKVPLTDYLLVRSSKGKLSLRRIDKINVVGQQEPLMEVLSPGSKNLKTYMMNRLLVHMCREFQAAEKRHLPPYICIDEFLSQFPYQSEASFRKRIKEYANLQRGTNGQSILVKKRNFRIWSEDELRKMVTPELVCAYESMQAGLYRLKHLGITETHPTNISSAMSQLPDEAIALAAASHIEREQQITPWNLSSNFVACTSQGKENIERMEINGVGDPSGRGMGFCYARLPPKPPGSSAMVKKTATANHGSSTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTKRQRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQHTREKCQEIWDRQVQCLSAVNGDENESDSEGNSDLDSFAGDLENLLDAEECEEGTNDLKHDKGDGVKGLKMRRRPTLAQAEEEIEDEVAEAAELCRLLMDDDEADRKKRKKAKVMVEEARLVPKMQSKFSFGNAEQVKQITNTLQSDGTNPLKEDVITDLREEEKFPVRKSKSKKVNKAKKNDSTPFSLPNKKIKLNIGEGINMPPEINFDLCLENQVFKEKKPLREIFVCGSCGQPGHMQTNKNCPKYGEDLETQLESTDMEKSSGKFSFVDPSSHSQHKAPTKKAMSKSATKIAPVDNSTKIPLKLKCGSTEKSSDKPAIETLQNSDKPVTSDSETAKFAKVNKIIIPNKVKPDDMQAESRKHAIVIRPPTDSGRRQVDSHKFPIKICPPTEIDKEQSHKKIVIKRTKEVIDLELDSPGGNTGLQHRKTKGIVEMSNFEKQKKQETMSGTEGFVKLNTREHRRWEEQEKRRNDARLQEEDRARRHHKEEIRMLKEQERLDEEDEEWQKAKKKKKKNPFLRDEYLDDPRVRRHDKRMLERDRSGKRRSVAELGKIGADYMPPTKRRRGGGGEVALANILESVVDTIVKDRYDLSYLFLKPVSKKAAPDYLDIIERPMDLSRIRERVRNMEYKSREDFRHDIWQITYNAHKYNDGRNPGIPALADMLLEYCDHLLNENDDGLTEAEAGIEIRDF 1970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00737 1970 SUPERFAMILY Bromodomain 1837 1959 IPR036427 GO:0005515
Pumo8g00737 1970 MobiDBLite consensus disorder prediction 157 183 - -
Pumo8g00737 1970 ProSitePatterns Bromodomain signature. 1871 1928 IPR018359 -
Pumo8g00737 1970 Gene3D - 113 159 IPR036741 -
Pumo8g00737 1970 Coils Coil 1754 1790 - -
Pumo8g00737 1970 Pfam Protein of unknown function (DUF3591) 674 1240 IPR022591 -
Pumo8g00737 1970 ProSiteProfiles Ubiquitin domain profile. 754 824 IPR000626 GO:0005515
Pumo8g00737 1970 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 104 1968 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Pumo8g00737 1970 Pfam Ubiquitin family 756 826 IPR000626 GO:0005515
Pumo8g00737 1970 MobiDBLite consensus disorder prediction 1542 1570 - -
Pumo8g00737 1970 MobiDBLite consensus disorder prediction 71 116 - -
Pumo8g00737 1970 ProSiteProfiles Bromodomain profile. 1866 1936 IPR001487 GO:0005515
Pumo8g00737 1970 SUPERFAMILY TAF(II)230 TBP-binding fragment 115 153 IPR036741 -
Pumo8g00737 1970 CDD Ubl_TAFs_like 754 825 - -
Pumo8g00737 1970 MobiDBLite consensus disorder prediction 1743 1767 - -
Pumo8g00737 1970 Gene3D - 754 827 - -
Pumo8g00737 1970 CDD Bromodomain 1855 1951 - -
Pumo8g00737 1970 SUPERFAMILY Ubiquitin-like 725 824 IPR029071 -
Pumo8g00737 1970 Coils Coil 1353 1373 - -
Pumo8g00737 1970 Gene3D - 1823 1968 IPR036427 GO:0005515
Pumo8g00737 1970 FunFam Transcription initiation factor TFIID subunit 1 736 826 - -
Pumo8g00737 1970 SMART ubq_7 754 826 IPR000626 GO:0005515
Pumo8g00737 1970 Pfam TATA box-binding protein binding 109 152 IPR009067 -
Pumo8g00737 1970 SMART bromo_6 1845 1956 IPR001487 GO:0005515
Pumo8g00737 1970 Pfam Bromodomain 1857 1933 IPR001487 GO:0005515
Pumo8g00737 1970 MobiDBLite consensus disorder prediction 1593 1613 - -
Pumo8g00737 1970 PRINTS Bromodomain signature 1917 1936 IPR001487 GO:0005515
Pumo8g00737 1970 PRINTS Bromodomain signature 1899 1917 IPR001487 GO:0005515
Pumo8g00737 1970 PRINTS Bromodomain signature 1883 1899 IPR001487 GO:0005515
Pumo8g00737 1970 PRINTS Bromodomain signature 1869 1882 IPR001487 GO:0005515
Pumo8g00737 1970 MobiDBLite consensus disorder prediction 1587 1613 - -
Pumo8g00737 1970 MobiDBLite consensus disorder prediction 1542 1562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00737 Pumo-Chr8 28633074 28653804 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00737 754 824 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 38.028 1.95e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00737 K03125 - gmx:100780733 3206.77