Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00719 ATGCTCAATAATTTTCAGAAATTGTCTCTTCTATTATTGACGTTGGTGTTTCTGCTGCCACTGAAGCCTGTCATAGGCAAGAACCACTGCACGGATAAATGTGGAGGGGTTCAAATTCAATTTCCATTTTATCTCAGAAACAGCAGTAGCAAGTTGATTCACACCACCGACTATCATCTCCCTGGGTTCGATCTGTTATGCACGGAGAAAGAGGAGACATTGCTGGAGCTGCCTGATGTTCCAATCAAGTTGGCTGTCAGAAAAATTGATTACAAATCTCAGCAAATTCAAATCTATGACCCTGCAAATTGCCTCCCCTCTCAGCTCTTGCAACTCAGCAACGCATCAATTTCTCCGTTCCAATTCGCGTCACAAGAGTTTGATAACCTTACCTTCTTCCGTTGCGATTCATCGATGTCGTGTCCTATTTTGCTTCTTCAATCCTTCCTCGACGTTATTAGATACCCCGAAATACTGTCCTGCACCAAAGTGAAAGATGTTTTGTCCGTCAACTGGAAGGATCCATATTACGTTTTTGACCCGAAGGTGACTATGGAATGGTCGAAACCTGACTGCAGACACTGTGAAGCACGAGACCAGAAATGTAGATGGAAGAATGGTACCAAAGGTGAAACTGAATGTTTCGTTTGCCCAACAAACACGATTCCAACATCAACTATTGTACTCATTGCTGCAGGAGGAATGGTTGGTTTGATGCTTTTGCTGCTATTGGTCACTGCATTGTTTTGCGTGTATCGCTATTATGAGAAGAAAGGAGAAGACCAAGCTAGGATAGAGAAATTCTTGGAGGATTATAGGGCAATGAAGCCTACGAGATTCACCTATGCTGACATTAAGAGAATCACAAATGGGTTTAGTGAAAGCTTAGGGGAAGGAGCTCACGGAGCAGTGTTCAAAGGAATGCTCTCTCGAGAAATTCTGGTTGCTGTGAAGATACTCAACAACAACGCAGTGGGAGATGGGAAGGATTTCATCAATGAGGTGGGAACCATAGGGAAAATTCATCATGTTAACATTGTTCGCTTGCTTGGATTCTGCGCGGACGGGTTCCACCGTGCACTCGTCTACGATTTCTTCCCGAACGGGTCACTGCAGAGATTCTTGGCTCCACCAGACAGCAAGGATGTTTTCCTTGGTTGGGAGAAGTTGCAACAAATTGCTCTTGGTGTTGCCAGAGGGCTTGAGTATCTCCATCTTGGTTGTGATCATAGAATACTTCACTTTGACATCAATCCTCACAATGTTTTACTAGATGACCACTTCGTCCCGAAAATCACTGATTTTGGACTTGCCAAGTTGTGTCCCAAAAATCAAAGCACGGTGTCAATGACCGCAGCCAGAGGAACCTTGGGCTACATTGCCCCTGAAGTTTTCTCGAGGAACTTCGGTAACGTGTCTTACAAGTCTGACATCTACAGTTACGGAATGTTGCTGCTAGAAATGGTTGGAGGAAGAAAGAATACAAATGTGTCTGCTGAGGAAAGTTTCCAAGTTCTATACCCTGAATGGATCCATAATTTGCTCGAAGGCAGAGACGTGCAAATTAGTCTTGAGGATGAGGGAGATGTTGAAATTGCAAAGAAACTCGCCATTGTAGGACTTTGGTGCATTCAGTGGAATCCAGTGGACCGTCCATCCATGAAAAAGGTGGTACAAATGCTTGAAGGGGATGGAGATGAGTTAATTGCACCCCCTACTCCTTTTGACATCTCTGAATCTTCTAGAACAAATGTGGTTGTTCCAGCAAGACGTCAGAATTTCGAGTTGGAAGTTATTCATGAAATGGAAGAATAA 1815 0.438 MLNNFQKLSLLLLTLVFLLPLKPVIGKNHCTDKCGGVQIQFPFYLRNSSSKLIHTTDYHLPGFDLLCTEKEETLLELPDVPIKLAVRKIDYKSQQIQIYDPANCLPSQLLQLSNASISPFQFASQEFDNLTFFRCDSSMSCPILLLQSFLDVIRYPEILSCTKVKDVLSVNWKDPYYVFDPKVTMEWSKPDCRHCEARDQKCRWKNGTKGETECFVCPTNTIPTSTIVLIAAGGMVGLMLLLLLVTALFCVYRYYEKKGEDQARIEKFLEDYRAMKPTRFTYADIKRITNGFSESLGEGAHGAVFKGMLSREILVAVKILNNNAVGDGKDFINEVGTIGKIHHVNIVRLLGFCADGFHRALVYDFFPNGSLQRFLAPPDSKDVFLGWEKLQQIALGVARGLEYLHLGCDHRILHFDINPHNVLLDDHFVPKITDFGLAKLCPKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNVSAEESFQVLYPEWIHNLLEGRDVQISLEDEGDVEIAKKLAIVGLWCIQWNPVDRPSMKKVVQMLEGDGDELIAPPTPFDISESSRTNVVVPARRQNFELEVIHEMEE 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00719 604 PANTHER RUST RESISTANCE KINASE LR10-RELATED 262 579 IPR045874 GO:0004672
Pumo8g00719 604 FunFam PR5-like receptor kinase 366 571 - -
Pumo8g00719 604 Pfam Wall-associated receptor kinase galacturonan-binding 30 100 IPR025287 GO:0030247
Pumo8g00719 604 Gene3D Transferase(Phosphotransferase) domain 1 366 568 - -
Pumo8g00719 604 Pfam Protein kinase domain 294 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00719 604 ProSiteProfiles Protein kinase domain profile. 290 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00719 604 SUPERFAMILY Protein kinase-like (PK-like) 272 562 IPR011009 -
Pumo8g00719 604 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
Pumo8g00719 604 Gene3D Phosphorylase Kinase; domain 1 264 365 - -
Pumo8g00719 604 FunFam serine/threonine-protein kinase PBS1-like 257 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00719 Pumo-Chr8 27284980 27287202 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00719 191 574 Receptor kinase-like Gene Family AT1G66910 44.198 1.16e-105 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pumo8g00719 Pkinase 4.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00719 - - gmx:100811260 992.26