Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00703 ATGCCACCCTTGCAAATGGGGTTACGTGAGTACATCGAAGCATTGGAGGAAGAGAGGAGAAAAATCCAAGTTTTCCCTAAAGAGCTTCCTTTGTCATTAGAGCTTGTCACGCAAGCAATTGAGGCTTGTAGACAGCAATTGGCTGGACCGGTTGCGGAGTACAATTTGAATGGCCAATCGGAGTGTTCGGAGCAGACATCAACGGATGAAGGGCCTGTTTTTGAGGAGTTCATTCCTATAAAGAAAAGGGCATCTCAATATTCTGTTGAAGAAGAAAATGAAGATGAAGATGATGAAGAACATTCTCACAAGCACAAAAAAGCCACAACTGATAAAAAGAAATCAGATTGGCTCAGATCCGTTCAGTTGTGGAATCCCAATCCCACCAAAGAGGATATTGTTGTGCCTAGGAAAACTAATGTTGTGGAAGTGAAGAGAAACTGTGGAGCTTTTCAACCGTTCCAAAGAGAGGAAAAAAGTGGTGGTGTTGGAAAGGGTAATAATGATGCATCAGCAATTGGTAAAGCACCCTCTTCACCACCAGTGCCTGCTACAAGTTCCACAGGACCATCAGTGAGAGTAGACAGCAAAAAAGAAGAGAAAGAACAAACTCAGAGAAAGCAACGCAGGTCTTGGTCACAGGAATTGCACAAGAGATTCTTGCATGCACTTCAACAACTTGGGGGTGCTGATTCTGCCACACCCAAACAGATCAGGGAGCTAATGAAGGTTGATGGCCTCACCAATGATGAAGTCAAAAGTCATTTACAGAAATTTCGTCTTCACACTAGAAGAAGCCCCATAATCCACAACAATGCCAGTTCTCAAGCAGGCCCTTTGTTTCTTGTGGGGAACATTTTTGTGCAGCCACAAGAATATGCTGCAGTGGCTGCTACCTCAACAGCATCTGGAGGAGAATTGACCACAGTTACCACTGCTACTGCTCCAACTGGAATATATGCTCCTGTGGCTGCACACCCTCCAGCTGTCACCCACACATCACCAATTATGAAGCATCAGCAGCAGCAGCATTCACATTCTGAGGAAAGGGCTAATCATAGTGTTCATTCAAACTCACCTGCTTCATCATCCTCCACACACACCATCACTACAACTTCACCACCTGCCCCCTAA 1134 0.4497 MPPLQMGLREYIEALEEERRKIQVFPKELPLSLELVTQAIEACRQQLAGPVAEYNLNGQSECSEQTSTDEGPVFEEFIPIKKRASQYSVEEENEDEDDEEHSHKHKKATTDKKKSDWLRSVQLWNPNPTKEDIVVPRKTNVVEVKRNCGAFQPFQREEKSGGVGKGNNDASAIGKAPSSPPVPATSSTGPSVRVDSKKEEKEQTQRKQRRSWSQELHKRFLHALQQLGGADSATPKQIRELMKVDGLTNDEVKSHLQKFRLHTRRSPIIHNNASSQAGPLFLVGNIFVQPQEYAAVAATSTASGGELTTVTTATAPTGIYAPVAAHPPAVTHTSPIMKHQQQQHSHSEERANHSVHSNSPASSSSTHTITTTSPPAP 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00703 377 MobiDBLite consensus disorder prediction 334 377 - -
Pumo8g00703 377 MobiDBLite consensus disorder prediction 153 213 - -
Pumo8g00703 377 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 349 IPR044787 GO:0003700|GO:0006355
Pumo8g00703 377 SUPERFAMILY Homeodomain-like 204 265 IPR009057 -
Pumo8g00703 377 MobiDBLite consensus disorder prediction 354 377 - -
Pumo8g00703 377 MobiDBLite consensus disorder prediction 98 114 - -
Pumo8g00703 377 Gene3D - 206 264 - -
Pumo8g00703 377 FunFam Myb family transcription factor 206 264 - -
Pumo8g00703 377 MobiDBLite consensus disorder prediction 84 114 - -
Pumo8g00703 377 NCBIfam myb-like DNA-binding domain, SHAQKYF class 207 262 IPR006447 GO:0003677
Pumo8g00703 377 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 204 264 IPR017930 -
Pumo8g00703 377 Pfam Myb-like DNA-binding domain 209 258 IPR001005 -
Pumo8g00703 377 MobiDBLite consensus disorder prediction 193 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00703 Pumo-Chr8 26841119 26843916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00703 10 325 G2-like Transcription Factor Family AT1G68670 47.416 1.85e-75 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pumo8g00703 Myb_DNA-binding 1.1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00703 - - gmx:100819750 520.005