Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00616 ATGGCGTCTCGGAAAGCGATTGGTTTCGAGTTTAGCTTGGAGATGGCATCGATGATTCTTTTTTCGAGGTTTCGGAAAGCTATTCTCGCCATGGCTACGATGTGCGAGCTTTCGAGGTGCACACGTTTCGTTGTTACATTGAACACTGCCAAGGTTCATAGAGCAAGACTGAAAGGCAATACAGATGATGTTGTTGTCAAGGTTCAACATCCTGGAATTCAGGATCTGATGATGACAGATATCCATAACTTGCAAGCGTTTGCATTATTCATGAGCAACTTGAGAGGATCCTCTATTTTCAAAATCATGGCACTTTTAGTGACTATCCTGGAATTCACACTTGAGTTACTTCCTTTCAATAGATATCCTGATGATGAGGCTGGTGAGGTTCCAATTGCCTATGTTGTTCGCTCTCCCAATAGTTCACTGATTGAAGAAGTTCAGAATTTTATTGCTAATCAGGGTTTCGTTGGTTTCTTACTTATTGTGCCTTTTGTTGTTGGATTTCTCACTGCTCAAAGATCCAGAAGCAGATTCGTGGCGGCCTCTAAGAAAGGATTGTTTTGTGAACTCAATATTCAAATGTTCGAATGGGTGCTAGTGAAAGCAGGGTTATCCTGA 621 0.4171 MASRKAIGFEFSLEMASMILFSRFRKAILAMATMCELSRCTRFVVTLNTAKVHRARLKGNTDDVVVKVQHPGIQDLMMTDIHNLQAFALFMSNLRGSSIFKIMALLVTILEFTLELLPFNRYPDDEAGEVPIAYVVRSPNSSLIEEVQNFIANQGFVGFLLIVPFVVGFLTAQRSRSRFVAASKKGLFCELNIQMFEWVLVKAGLS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00616 206 Pfam ABC1 atypical kinase-like domain 50 93 IPR004147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00616 Pumo-Chr8 22207123 22213712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00616 122 154 Monolignol Biosynthesis Gene Families AT4G05160 70.588 4.17e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00616 K08869 - gmx:100813009 80.4925