Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00609 ATGGCGACGGCGACGGCGGGTGGTGGTGGCAGCGGCGGCGTGGGCGTAATGGCAGGGAGTAGCACTGTCTCCACTCCGTCGAGTTGCGGCTGCGCGTGTTCTTCCAATTCCAACAACAACAGTGAGGACACTCTGATCGAATCGCCGATTCTGATATTCTGTTTTTTCCACAAAGCAATTAGCTCAGAGCTCCAATCCCTCCACGCAACCGCCTTCGATTTCGTTTCCAACCGCCGCCATGAACCACACTCTCTCCTCAAAAAAATCAAATCCTTCTCCCACCGCTGCCACTTTCTTCGCACTCTCTACAAGCACCACTGCAATGCCGAGGACCAGGTCATATTTCCTGCCTTAGATAAACGAGTGAAGAATGTTGCACACACCTATTTTCTAGAACACGAGGGCGAGGGAGAGGGTCTTCTTTTTGATCAATTGTTCAAGTTGCTAAATTCAATTTGCTAA 462 0.5065 MATATAGGGGSGGVGVMAGSSTVSTPSSCGCACSSNSNNNSEDTLIESPILIFCFFHKAISSELQSLHATAFDFVSNRRHEPHSLLKKIKSFSHRCHFLRTLYKHHCNAEDQVIFPALDKRVKNVAHTYFLEHEGEGEGLLFDQLFKLLNSIC 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00609 153 Gene3D nmb1532 protein domain like 48 152 - -
Pumo8g00609 153 CDD Hr-like 56 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00609 Pumo-Chr8 21835672 21838495 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00609 47 152 C2H2 Transcription Factor Family AT3G18290 35.185 7.84e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00609 K16276 - gmx:100783072 205.297