Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00604 ATGTTTGCTCCTGTGGCAGAACTTCATCATCATTCTAAATTGTGGGGTAGAAGCTTGGTAGGAAAATGTGTTTTACTTGATTCTGTTAGGTTCCAATTTTATGGAAAATCAACCATTCTTAGATTGCTATTCAGGTTCTTCGATCCTCATTCTGGAAGTATAAAGATAGATGATCAAGATATTCGGGAGGTAACCCTTGAGAGTTTGCGGAAGTCCATTGGTGTTGTTCCACAAGATACTGTACTTTTCAATTATACAATATTTCATAACATTCACTATGGTCGGCTTTCTGCAACAGAAGAGGAGGTCTATGAAGCTGCTCAGCAAGCAGCAATTCATAACACTATCATGAATTTTCCTGATAAATATTCAACTGTTGTGGGAGAGTGA 390 0.3769 MFAPVAELHHHSKLWGRSLVGKCVLLDSVRFQFYGKSTILRLLFRFFDPHSGSIKIDDQDIREVTLESLRKSIGVVPQDTVLFNYTIFHNIHYGRLSATEEEVYEAAQQAAIHNTIMNFPDKYSTVVGE 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00604 129 Pfam ABC transporter 35 114 IPR003439 GO:0005524
Pumo8g00604 129 Gene3D - 35 129 IPR027417 -
Pumo8g00604 129 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 129 IPR027417 -
Pumo8g00604 129 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 35 129 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00604 Pumo-Chr8 21320743 21322398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00604 17 129 Calmodulin-binding Proteins AT2G36910 43.363 6.01e-25 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00604 K05662 - gmx:100779975 181.8