Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00600 ATGGAGGCGCAACCCACTCCTCCGCCGCCAGACTCGGTGGATTCCTCTCCACGCGCCTCCTGGGACGAGCCCTCTCCTCCTCCTCCGGGCTCCGCCAAGCTCCGGCTGATGTGCAGCTACGGCGGCCACATCGTCCCCCGCCCCCACGACAAGTCCCTCTGCTACGTCGGCGGCGACACCCGTATCGTGGTGGTGCCCCGCCAAACCTCCCTCTCGGACCTCTCCACGCGCCTCTCCAGGTCGTTCCTCCACGCGCGCCCCTTCGTCCTCAAGTACCAGCTCCCCAGCGAGGACCTCGACTCCTTAGTCTCCGTCACCACCGACGAGGATCTCGAGAACATGATCGACGAGTACGATCACCGCACAACGGAAAACTCATCAACCAACAACAACAACAACAGTAACAGCAACAGCAACAGCAACAGGCCTTCGAGAATTCGCCTCTTCCTCTTCCCGGCCCAGCCCGATGGGCCTCTCGGGCTGGGCTCCGCGAAGTCCGAGGAGTGGCTCAGCGGGTCCCTCGACGGGGGCCTGTCCGAGTCCGCATCCGTGAACTGCCTCCTCGGACTCGACGACGAGGTTGTTGCCGCCGCTGTGAACAGCGGCGGCAACAACGGGAAGGTTTTCAAGGAGGTGTCGGATTCGCCTATGCTGGAGAGCAATTCGTCTTTCGGGTCTGCTTCCTCGGTGCCGAATTTGCCGCCGATTAAGGTTCACGTGGAGGATCAGAAGGGGGTGGGGATTATTGAGGAACAGTTTGCTCAGTTGGGTGTGGGACAGAAGCAAGAAGAGGGGGGTTTTGTTGCGGTGACGACGGCGACGGTGACGGAATTCGCGGCGGCGAACCGGATTATCTCCGATGACGAGAGATCCGATCATGGGGTCCCTGTGGGGTATAGAAAACCGCCAACCCCACCGCCTCAGTCTCAGCCTCAGCCTCCCCAATTTCAACAGAAATCAGCTGGTGTTGTTGATTTGCCTTCCCCTGATTCACGCTCAAGTGATAGTAGTCTTTCAAATGCAATGTCGCGCCCAAAACCAGCAATCTATCAAGACCAAGTTCAAATTCAATCTGGAAATTCTCAGGTTCCTAGCAATACCTCGGTTGATCCAAAGCTTATTGTGACTGATCAACAAGGTTGGATTCAGATGCAGCAGCATGTGCAAGAACCTGGATATGTTTTGCAGCCACAACAGCCACTGCCGCAGCAGCATCAGACTCAACAGCCGCAGCAGCATCAGACTCAACAGCCACAGCAGCAGCATCGGCCACAGCAGTATATGCACAGCACACATTTAATTCACCATACCCCTGCAGGGCCTGTGCCAATCCCTTCTGCATACTATCCTGTGTATCAGCAACAACTCCATCCCCAACATCACCATCACCTTGATCAACAATACCCGGTTTACTACATGCAGTCAGGACAGGCCCAACCATACAACTTGTCTGCGCAGCCGGTTAATGTAGCTGAATCTGCCACAACTATCCCTTCTAGCCAGTCCCAAAATCAGCCAAATTCTACTGCTTACAACCCAACAAGGAATCCTAATTCTGAAATGGCAGCAGGTGCATACAGAACCGCATCTGCCACCCCTCAATTGGTTCAAGTTCCTTCTAGTAAGCATCAACAGCAATATGTTGCTTACTCTCAAATTCATCATCACCATCCTCAATCGGTGCCTCCTAATTCTGCAGTACCTGCTAATTATGCTTACAACTATGCAGATCCTGCACATGCTCAAGTATTCTATACTCAAACTTTGGCACCCTCCATGCCTTCACAGTACCAGACCATGATGCAGCCGGAAGTTTCCGCTCAGCTTCCCTCAGACAGCATGAAGCAGCAGGTGAGAACCTCGCAGCCACTGTGA 1875 0.5467 MEAQPTPPPPDSVDSSPRASWDEPSPPPPGSAKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVPRQTSLSDLSTRLSRSFLHARPFVLKYQLPSEDLDSLVSVTTDEDLENMIDEYDHRTTENSSTNNNNNSNSNSNSNRPSRIRLFLFPAQPDGPLGLGSAKSEEWLSGSLDGGLSESASVNCLLGLDDEVVAAAVNSGGNNGKVFKEVSDSPMLESNSSFGSASSVPNLPPIKVHVEDQKGVGIIEEQFAQLGVGQKQEEGGFVAVTTATVTEFAAANRIISDDERSDHGVPVGYRKPPTPPPQSQPQPPQFQQKSAGVVDLPSPDSRSSDSSLSNAMSRPKPAIYQDQVQIQSGNSQVPSNTSVDPKLIVTDQQGWIQMQQHVQEPGYVLQPQQPLPQQHQTQQPQQHQTQQPQQQHRPQQYMHSTHLIHHTPAGPVPIPSAYYPVYQQQLHPQHHHHLDQQYPVYYMQSGQAQPYNLSAQPVNVAESATTIPSSQSQNQPNSTAYNPTRNPNSEMAAGAYRTASATPQLVQVPSSKHQQQYVAYSQIHHHHPQSVPPNSAVPANYAYNYADPAHAQVFYTQTLAPSMPSQYQTMMQPEVSAQLPSDSMKQQVRTSQPL 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00600 624 MobiDBLite consensus disorder prediction 299 313 - -
Pumo8g00600 624 SMART PB1_new 48 153 IPR000270 GO:0005515
Pumo8g00600 624 MobiDBLite consensus disorder prediction 314 344 - -
Pumo8g00600 624 MobiDBLite consensus disorder prediction 284 344 - -
Pumo8g00600 624 MobiDBLite consensus disorder prediction 399 427 - -
Pumo8g00600 624 PANTHER OS05G0427100 PROTEIN-RELATED 10 466 - -
Pumo8g00600 624 Gene3D - 53 129 - -
Pumo8g00600 624 CDD PB1_UP2 37 151 - -
Pumo8g00600 624 MobiDBLite consensus disorder prediction 124 141 - -
Pumo8g00600 624 MobiDBLite consensus disorder prediction 121 141 - -
Pumo8g00600 624 MobiDBLite consensus disorder prediction 492 520 - -
Pumo8g00600 624 MobiDBLite consensus disorder prediction 602 624 - -
Pumo8g00600 624 MobiDBLite consensus disorder prediction 1 30 - -
Pumo8g00600 624 SUPERFAMILY CAD & PB1 domains 49 156 - -
Pumo8g00600 624 Pfam PB1 domain 49 151 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00600 Pumo-Chr8 21109359 21111971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00600 31 191 MAP Kinase Kinase Kinase AT1G79570 36.364 4.46e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00600 - - gmx:100805172 751.895