Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00597 ATGTTCCCTTTGGTTGTGTTGCTTTTTCTTGCGTGCAATTTTCACGCTGCACCTGTGAGCTCTTTGACCGTTGAAGGCTCTGTGCTTTTGGCACTGAAGAAGTCCATCATCACAGACCCAGAAGGGTCCATGAGTAACTGGAACTCTTCTGATGACACCCCATGTTCATGGAATGGGATCACATGCAAGGACCAAAGTGTTGTCTCCATTAGTATCCCAAAGAGGAAGCTTTATGGGGTCCTTCCCTCGGAGCTAGGGTCACTTTCCCACCTCCGCCATCTGAATTTGAGGAACAACAACCTCTTTGGGGAGTTGCCTGTTGGGCTCTTTGATGCTCAGGGACTGCAAAGTTTGGTGCTTTATGGAAATTCCTTATCTGGGTCTGTTCCTAATGAGATTGGGAAGCTCAGGTACCTTCAAACTCTAGATTTATCACAGAATTTCTTCAATGGGTCTTTACCTGCTGCAATAGTCCGATGCAAGAGGCTCAGAGCATTGGTTCTTAGTCATAACAATGTCACAGGTCATCTGCCAGATGGGTTTGGTGGTGGTTTGTCTTCCCTGGAAAAACTTGACCTTTCTTTCAATGAATTCAATGGTTCAATTCCTAGTGACATGGGAAAGCTGTCAAGCCTGCAGGGGACTGTTGATTTGTCTCATAATCATTTCAGTGGTTCAATCCCAGCTAGTCTTGGTAATTTGCCTGAGAAGGTTTACATTGATCTCACTTACAACAATTTAAGTGGTCCAATACCTCAGACTGGTGCTTTGATGAATAGAGGGCCAACTGCTTTTATTGGCAATTCTGGTCTTTGTGGCCCACCTTTGAAGAATCTGTGTGCCCCAGAAACTCATGGTGCCAGTTCACCTTCCTCTTTTCCATTTTTGCCTGATAATTACCCACCTCAGGATAGTGATGATGGTTTTGTGAAAAGTGGGAAAAGTAAAAGGCTAAGTAAGGGTGCTGTGGTTGGGATTGTTGTGGGGGATATAGTTGGAATTTGCCTTTTGGGTTTGCTGTTCTCTTACTGCTACTCAAGGGTTTGGGGTTTTACTCAGGATCAGGAGGAAAAGGGTTTTGACAAGGGAGGGAGATTGAGGAAGGAGTGCTTATGCTTCAGGAAGGATGAATCTGAGACCCTATCTGATCATGTTGAGCAATATGATCTTGTCCCATTGGATGCTCAAGTGGCCTTTGATTTGGATGAGCTTCTTAAGGCTTCAGCTTTTGTTCTGGGAAAGAGTGGAATAGGGATTGTCTACAAAGTTGTGCTTGAAGAAGGGCTCACCTTGGCTGTGAGAAGATTAGGGGAGGGAGGTTCTCAAAGGTTTAAAGAGTTCCAAACGGAAGTTGTAGCAATAGGGAAGTTAAGGCATCCAAATATTGTTACTCTGAGAGCCTATTACTGGTCTGTTGATGAGAAGCTTCTCATCTATGATTATGTTCCCAATGGAAGCCTTGCTACAGCAATTCATGGGAAAGCTGGACTTGCCACATTTACACCACTATCTTGGTCTGATAGAGTGAAAATCATGAAGGGAATTGCCAAAGGATTGGTCTACCTGCATGAATTTAGTCCGAAAAAATATGTCCATGGAGACCTGAAGCCAGGTAACATACTGTTAGGACATGGCATGGAGCCACACATTTCCGATTTCGGTCTTGGACGCCTTGCTAACATTGCTGGAGGGTCTCCAACCTTGCAATCCAACCGGGTGGCTGCGGAGAAATCGCAAGAAAGACAGAGGAGCTTATCCACAGAAGTTACAACTAGTATTTTGGGAAATGGCTATCAAGCTCCAGAAACACTGAAAGTGGTGAAGCCATCACAGAAGTGGGATGTTTACTCCTATGGAGTGACTTTACTAGAATTGATTACAGGAAGATTGCCTATTGTCCAAGTGGGTAACTCAGAAATGGACCTTGTTCAATGGATTCAGTTCTGCATTGATGAGAAGAAGCCACTCTCAGATGTATTAGATCTTTATTTAGCTGAAGATGCAGATAAGGAGGAGGAAATCATTGCAGTTTTGAAGATTGCAATTGCTTGTGTCCATAGCAGCCCAGAAAAGAGACCCATAATGAGGCATGTGCTTGATGCTTTGGATAGATTATCCATATCCTCTGATTAA 2133 0.4402 MFPLVVLLFLACNFHAAPVSSLTVEGSVLLALKKSIITDPEGSMSNWNSSDDTPCSWNGITCKDQSVVSISIPKRKLYGVLPSELGSLSHLRHLNLRNNNLFGELPVGLFDAQGLQSLVLYGNSLSGSVPNEIGKLRYLQTLDLSQNFFNGSLPAAIVRCKRLRALVLSHNNVTGHLPDGFGGGLSSLEKLDLSFNEFNGSIPSDMGKLSSLQGTVDLSHNHFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQTGALMNRGPTAFIGNSGLCGPPLKNLCAPETHGASSPSSFPFLPDNYPPQDSDDGFVKSGKSKRLSKGAVVGIVVGDIVGICLLGLLFSYCYSRVWGFTQDQEEKGFDKGGRLRKECLCFRKDESETLSDHVEQYDLVPLDAQVAFDLDELLKASAFVLGKSGIGIVYKVVLEEGLTLAVRRLGEGGSQRFKEFQTEVVAIGKLRHPNIVTLRAYYWSVDEKLLIYDYVPNGSLATAIHGKAGLATFTPLSWSDRVKIMKGIAKGLVYLHEFSPKKYVHGDLKPGNILLGHGMEPHISDFGLGRLANIAGGSPTLQSNRVAAEKSQERQRSLSTEVTTSILGNGYQAPETLKVVKPSQKWDVYSYGVTLLELITGRLPIVQVGNSEMDLVQWIQFCIDEKKPLSDVLDLYLAEDADKEEEIIAVLKIAIACVHSSPEKRPIMRHVLDALDRLSISSD 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00597 710 FunFam Leucine-rich repeat protein kinase family protein 482 708 - -
Pumo8g00597 710 Gene3D Phosphorylase Kinase; domain 1 375 481 - -
Pumo8g00597 710 SUPERFAMILY Protein kinase-like (PK-like) 411 702 IPR011009 -
Pumo8g00597 710 SMART LRR_typ_2 88 112 IPR003591 -
Pumo8g00597 710 SMART LRR_typ_2 136 160 IPR003591 -
Pumo8g00597 710 SMART LRR_typ_2 185 209 IPR003591 -
Pumo8g00597 710 SMART serkin_6 411 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00597 710 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 76 704 - -
Pumo8g00597 710 Gene3D Ribonuclease Inhibitor 78 284 IPR032675 -
Pumo8g00597 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 530 542 IPR008271 GO:0004672|GO:0006468
Pumo8g00597 710 Gene3D Transferase(Phosphotransferase) domain 1 482 709 - -
Pumo8g00597 710 Pfam Leucine rich repeat 162 223 IPR001611 GO:0005515
Pumo8g00597 710 Pfam Leucine rich repeat 89 147 IPR001611 GO:0005515
Pumo8g00597 710 FunFam Leucine-rich repeat receptor-like protein kinase 23 179 - -
Pumo8g00597 710 CDD STKc_IRAK 412 705 - -
Pumo8g00597 710 Pfam Protein kinase domain 412 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00597 710 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Pumo8g00597 710 FunFam Leucine-rich repeat receptor-like protein kinase 389 481 - -
Pumo8g00597 710 Gene3D Ribonuclease Inhibitor 19 77 IPR032675 -
Pumo8g00597 710 ProSiteProfiles Protein kinase domain profile. 406 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00597 710 SUPERFAMILY L domain-like 27 277 - -
Pumo8g00597 710 FunFam Leucine-rich repeat receptor-like protein kinase 187 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00597 Pumo-Chr8 20966834 20969983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00597 4 710 Receptor kinase-like Gene Family AT2G01210 68.061 0.0 980
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo8g00597 Pkinase 1.9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00597 - - gmx:100810225 1321.22