Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00591 ATGGACTATAATAGTATTCTGGGTCTTCTCAAACTTCGAATTAAAAGAGGCACTAATCTTGCAATACGCGATGCAATTAAAATGCGTGCTAGCGACCCTTATGTCGTCATCAACATGGGTGAACAGTTGATGAAGACTTGTGTTGTAAAAGACAACTGCAATCCTGAGTGGAATGAAGAATTCACCCTCTCTATAAAGGACGTTAAAATCCCAATACATCTGTCGGTTTATGACAAGGACACTTTCTCTGGGGATGACAAAATGGGTGAGGCAGATATAGACTTAAAACCATATGTTCAATGTGTGCAGATGGGGTTGGACCAGCTCCCAGATGGTTCTTTAGTCAAGATAGTCAAGAGTATTCAACCAGATGAAACTAATTACCTTGCTGAAGAGAGCAACTGCATTTGGCTAAATGGAAATATTGTCCAAGAAATGATTTTGAAATTGAGAAATGTTGAGAGTGGGGAAGTAGTTGTGGAAATTGAGTGGGTTGATGTTATTGGTTGCAAGGGCTTATCACAGCTAGAACTTTAA 537 0.3948 MDYNSILGLLKLRIKRGTNLAIRDAIKMRASDPYVVINMGEQLMKTCVVKDNCNPEWNEEFTLSIKDVKIPIHLSVYDKDTFSGDDKMGEADIDLKPYVQCVQMGLDQLPDGSLVKIVKSIQPDETNYLAEESNCIWLNGNIVQEMILKLRNVESGEVVVEIEWVDVIGCKGLSQLEL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00591 178 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 96 IPR035892 -
Pumo8g00591 178 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 6 171 IPR044562 -
Pumo8g00591 178 Gene3D C2 domain 6 170 IPR035892 -
Pumo8g00591 178 SMART C2_3c 9 107 IPR000008 -
Pumo8g00591 178 Pfam C2 domain 9 97 IPR000008 -
Pumo8g00591 178 ProSiteProfiles C2 domain profile. 1 110 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00591 Pumo-Chr8 20736676 20739123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00591 44 175 C2H2 Transcription Factor Family AT1G70790 57.463 4.94e-50 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00591 - - gmx:100784381 301.212