Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00586 ATGGCCTCTCGTGAAGGGAGGCGGCGTCATCATGATCTTGTGCCTCTTGCCGCATTGCTTACCAGAGAGATGAAGAATGAGAAGATGGAGAAGCCCTCTGTGCGGTACGGGTATGCTGCTCAATCTAAAAAAGGGGAGGATTACTTCCTAATTAAGACTGATTGTCAGCGAGTTCCTGGGAATTCTTCATCATCGTTTTCTGTATTCGCGATCTTTGATGGGCACAATGGAAATGTTGCAGCTATCTTTACTAGGGAGCATTTGTTAAATCATGTGTTGGGAGCTCTCCCTCGAGGGCTTGGACGAGAAGAGTGGCTGCAAGCTTTACCTCGGGCATTGGTTGCTGGGTTTGTGAAGACTGACAAGGAATTTCAGAGAAGAGGAGAAACTTCTGGAACCACAGCCACATTTGTGATAGTGGATAGGTGGACTGTAACAGTTGCATCTGTGGGAGATTCCCGTTGTATATTAGATGTGCAGGGTGGTGCTGTTACCAACTTAACTGTTGATCACAGACTTGAGGAGAATATTGAAGAGAGGGAACGTGTTACTGCAAGTGGAGGTGAAGTTGGAAGGCTTAGCATTGTAGGGGGTGTTGAGATTGGTCCACTTCGTTGCTGGCCTGGGGGTCTATGCCTTTCTAGGTCAATAGGAGACATGGATGTTGGGGAGTTTATAGTTCCAGTACCATATGTCAAACAAGTGAAGCTATCAAAGGCTGGTGGGAGGCTTATAATTGCTTCTGATGGTATCTGGGATGCTCTATCATCTGAAAAGGCAGCAAAATCTTGTCATGGTTTGCCTGCTGAACTTGCTGCGAAGCAGGTTGTAAAGGAAGCACTGAGGACAAGAGGGTTAAAGGATGACACAACTTGCATTGTAGTTGATATAATTCCACCAGATAATAGATTGCTGCTGTCGCCTCCCCCAAAAAGCAGAACAATGGAGGAACTATTTGAAGAAGGATCAGCAATGCTTGCTGAAAGATTAGGAAATGATGACAACCCAAGTCAATCAACATCTGGCATTTTCGTATGTGCCGTGTGCCAGGTTGACCTTGCTTCAAGCGAGGGCATCTCTGTCCATGCAGGTTCCATTTTCTCCACCAGCTCAAAGCCTTGGCAAGGTCCGTTTCTATGTGCTGATTGTCGCAACAAGAAGGATGCTATGGAAGGAAAACGCCCAAGTGGAGTTAAAGTGTCATAG 1206 0.4627 MASREGRRRHHDLVPLAALLTREMKNEKMEKPSVRYGYAAQSKKGEDYFLIKTDCQRVPGNSSSSFSVFAIFDGHNGNVAAIFTREHLLNHVLGALPRGLGREEWLQALPRALVAGFVKTDKEFQRRGETSGTTATFVIVDRWTVTVASVGDSRCILDVQGGAVTNLTVDHRLEENIEERERVTASGGEVGRLSIVGGVEIGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKLSKAGGRLIIASDGIWDALSSEKAAKSCHGLPAELAAKQVVKEALRTRGLKDDTTCIVVDIIPPDNRLLLSPPPKSRTMEELFEEGSAMLAERLGNDDNPSQSTSGIFVCAVCQVDLASSEGISVHAGSIFSTSSKPWQGPFLCADCRNKKDAMEGKRPSGVKVS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00586 401 FunFam probable protein phosphatase 2C 5 35 302 - -
Pumo8g00586 401 Pfam Protein phosphatase 2C 61 282 IPR001932 -
Pumo8g00586 401 SMART PP2C_SIG_2 51 297 IPR001932 -
Pumo8g00586 401 SMART PP2C_4 25 295 IPR001932 -
Pumo8g00586 401 CDD PP2Cc 36 297 IPR001932 -
Pumo8g00586 401 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Pumo8g00586 401 PANTHER PROTEIN PHOSPHATASE 30 296 IPR015655 GO:0004722|GO:0006470
Pumo8g00586 401 Gene3D - 34 302 IPR036457 -
Pumo8g00586 401 SUPERFAMILY PP2C-like 28 297 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00586 Pumo-Chr8 20665844 20669706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00586 1 400 PP2C-type Phosphatase Gene Family AT1G68410 75.057 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00586 - - gmx:100779571 723.005