Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00583 ATGAGTAGCAATGACCAAACTTCTGGTGCTAGTCTCTATATTAGGGCTTTAATTTGCCACGCTGCTGCTGGTGCCTCTGCTGGGGCAATAGCGGCTACATTTGTGTGCCCATTGGATGTGATCAAGACTAGGCTACAAGTTCATGGCCTTCCTCATGGGCAGAAAGGTAGTGTCATTGTCACAAGCTTGCAAAATATAGTAAGGAATGAAGGCTTCAGGGGAATGTACCGTGGCCTTTCACCAACAATACTTGCATTACTTCCAAACTGGGCAGTTTACTTCACAAGTTATGAGCAACTAAAGGGCCTACTTCGTTCACGCGCAGATGGTTGCGATGAACTCACAACTACTGGAAATATTATAGCTGCTGCTGGTGCTGGTGCAGCAACAGCAATTTCTACAAATCCATTGTGGGTTGTTAAGACTAGACTTCAAACACAAGGAATGAGGACTGATGTTGTTCCATACAAGAGCGTTCTTTCTGCTTTGACAAGGATTACACATGAGGAAGGCATACGGGGCCTATATAGTGGCATTGTGCCATCATTGGCTGGCGTAAGTCATGTTGCAATTCAATTTCCAGCATATGAAAAGATCAAGTTATACATGGCAGAAAAAGAAAACACAACTGTTGACAAGCTAACTCCTGGGAGTGTTGCCATTGCGTCATCAATTTCAAAAGTAGTTTGCCTCTGTAATTACTTATCCACATGA 714 0.4356 MSSNDQTSGASLYIRALICHAAAGASAGAIAATFVCPLDVIKTRLQVHGLPHGQKGSVIVTSLQNIVRNEGFRGMYRGLSPTILALLPNWAVYFTSYEQLKGLLRSRADGCDELTTTGNIIAAAGAGAATAISTNPLWVVKTRLQTQGMRTDVVPYKSVLSALTRITHEEGIRGLYSGIVPSLAGVSHVAIQFPAYEKIKLYMAEKENTTVDKLTPGSVAIASSISKVVCLCNYLST 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00583 237 Pfam Mitochondrial carrier protein 114 205 IPR018108 -
Pumo8g00583 237 Pfam Mitochondrial carrier protein 20 105 IPR018108 -
Pumo8g00583 237 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 18 230 IPR044712 GO:0006862|GO:0055085
Pumo8g00583 237 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Pumo8g00583 237 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Pumo8g00583 237 PRINTS Mitochondrial carrier protein signature 129 147 IPR002067 GO:0055085
Pumo8g00583 237 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Pumo8g00583 237 SUPERFAMILY Mitochondrial carrier 18 231 IPR023395 -
Pumo8g00583 237 ProSiteProfiles Solute carrier (Solcar) repeat profile. 114 202 IPR018108 -
Pumo8g00583 237 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
Pumo8g00583 237 Gene3D Mitochondrial carrier domain 15 235 IPR023395 -
Pumo8g00583 237 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 2 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00583 Pumo-Chr8 20630262 20635818 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00583 33 229 Chloroplast and Mitochondria Gene Families AT1G25380 72.637 1.70e-95 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00583 K15115 - gmx:100816376 408.297