Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00557 ATGAAGACCTTGTGGACGAGGAAGCCGAAGACGCCAACGCTGGGTTTCCGCCGTCTTCCGTCGACCGGAAATACGAGTGCCAGTACTTGTTGCAGAGAGTTCGCGAACTCACAAGCTCTGGGAGGACACCAAAACGCGCACAAGAAAGAGCGGCAACAGCTGAAGCGCGCGCAGTTACAACTACAAGCCACGCGAAACCCCGCTGTTTCCTTCGTTCGGAATCCAATCATCTCCGCCTTCGCTCCGCCGCCGCACCTGCTGACAACGCCGGCCGCCCCGCCTTCGTGGGTTTACATGCCGCCACGTGCTGCGCCTCCTCCCTTCCATGTGTCGGTTTCACAGGGGTGCGTGTTCCCCTCGGCGAACAGCGCCGTCAGTAACAATAGCATTGTAACGGATGCAGGGGTGTTGCCGTATGTTGGCGGAGTAGGGGATTCCACGATGGGCCCGCAAGTACAGGCCCGGGCCCACTACGGGAATTTTGGTGACGGGCTCGACTTGGACTTGCACCTTAGCCTAGCCCCGCCGTGA 531 0.6008 MKTLWTRKPKTPTLGFRRLPSTGNTSASTCCREFANSQALGGHQNAHKKERQQLKRAQLQLQATRNPAVSFVRNPIISAFAPPPHLLTTPAAPPSWVYMPPRAAPPPFHVSVSQGCVFPSANSAVSNNSIVTDAGVLPYVGGVGDSTMGPQVQARAHYGNFGDGLDLDLHLSLAPP 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00557 176 PANTHER ZINC FINGER PROTEIN 5 30 175 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00557 Pumo-Chr8 19400265 19401016 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00557 30 175 C2H2 Transcription Factor Family AT1G68360 49.412 1.92e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00557 - - tpra:123911684 170.629