Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00535 ATGATTAGGCTAGAAAAGAAGATCACTAATTTAGAATTGGAGAATCAGGTCCTACGTCAACAAGTTGTGTCCATGGCACCTAATAAGTTCCTTTCAGGACTTTCAAGATCAATTATCCAGACCCAGGATAACAATGATGTCTTGGCTTATTGGTTATCCAATGCCTCCACACTTCTCTTGTTACTCCAACACACGCTCAAGGCTAGTGGTGCTGCTGGAATGGCTCCGCAATGTCATCGTTCTTCATCAGCAACCCTGTTTGGGAGGATGACTCAAAGTTTCCGTGGAACTCCAGCTAGAGTCAATCTTTCCCTAATCAATGGTAGCACAAGCAGAGGAGTATATACATTAAGACAAGTTGAAGCCAAGTACCCAACTCTACTTTTCAAAAACCAACTTACAACATATGTGGAAAAGATATATGAAATGATTCGTGATAATTTGAAGAAATAA 453 0.4018 MIRLEKKITNLELENQVLRQQVVSMAPNKFLSGLSRSIIQTQDNNDVLAYWLSNASTLLLLLQHTLKASGAAGMAPQCHRSSSATLFGRMTQSFRGTPARVNLSLINGSTSRGVYTLRQVEAKYPTLLFKNQLTTYVEKIYEMIRDNLKK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00535 150 Coils Coil 1 21 - -
Pumo8g00535 150 ProSiteProfiles Dilute domain profile. 28 150 IPR002710 -
Pumo8g00535 150 PANTHER MYOSIN 29 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00535 Pumo-Chr8 17595289 17597160 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00535 1 40 Myosins gene family AT1G54560 72.500 4.49e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00535 K10357 - vum:124841093 180.259