Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00527 ATGAGGGGGTTTGTGATTCCAGTATCATACTTGAACCAACCTTTATTTCAAGAATTATCAAGCCAAGCAGAAGAAGAATTTGGATATGATCATCCAACGGGCAGTCTCACAATTCCCTGCCAGGAGAATGAGTTCCTAACCGTCGCCTCTTTCTTCAATGCGTTACGAACGATGGATTGCGATATCAGAGTTAAAGTTCCCACCTTTGTTTGTCTTTCTTCCCTCACTGCCCTCAAGTTGTCTGGAATCACGCTTACTTGTGTCCCTTCTAATGACTCGCAAAACTTGAGCCTAAACTTCCCAGTTCTTAAAAATGGGTACATGTCAGACGCCAATTTGTTAGACCTATCTATAGAACCTATTGCCTCTGCTAATATTTATCCACGCAAGTGTAAAGAGGGGAGTGAAGCACAAACAACATCTCTTGCTTACGAGTTTCTGAAAAAATTCAATAATAAAATTGTTGTGCTAGCAGGAGTTTCTTTGTTCGATCTTCCTCAATTTGAAATGTTGAGTCGTGTGGAGCTAGATAAAGTTATTGGCCTAATGTTGTGGTTCTTACTTCTAAAAGCACCATTTCTCCATACTCTTATTTTTAAGGAACTACTTAATTTTGAGGATCTTTCGGAACATAAAATTGCGCCACCTTGTGTTACATCTAGCCGTCAAGTGGTAAATTTTGGAAGATTTAACGGTGATGAACATGAGCTTCATTTTGCTAAATTTGTAATAGAAAAGGCTCTAGTCTTGAAGAGGGCGAGTTTCACCGCTACTAGGAATTTTCGCGTGGGGTCGAAATTTGAAGAAGTTAAAGAAAAGAAATTCTCATTTAAGACAAGTGTCTCCGCGATTATAGAATTTCCATAA 867 0.3899 MRGFVIPVSYLNQPLFQELSSQAEEEFGYDHPTGSLTIPCQENEFLTVASFFNALRTMDCDIRVKVPTFVCLSSLTALKLSGITLTCVPSNDSQNLSLNFPVLKNGYMSDANLLDLSIEPIASANIYPRKCKEGSEAQTTSLAYEFLKKFNNKIVVLAGVSLFDLPQFEMLSRVELDKVIGLMLWFLLLKAPFLHTLIFKELLNFEDLSEHKIAPPCVTSSRQVVNFGRFNGDEHELHFAKFVIEKALVLKRASFTATRNFRVGSKFEEVKEKKFSFKTSVSAIIEFP 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00527 288 Pfam FBD 214 255 IPR006566 -
Pumo8g00527 288 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 3 50 IPR003676 GO:0009733
Pumo8g00527 288 Pfam Auxin responsive protein 2 49 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00527 Pumo-Chr8 16344913 16348131 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00527 1 63 Calmodulin-binding Proteins AT5G20810 42.857 3.11e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00527 K14488 - ccaj:109788903 210.69