Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00526 ATGGGTTTTCGTTTACCCGGTATCAGAAGGGCATCATTTGCTGCAAACCAAGCATCTTCAAAAGCTGTGGAGGTGCCAAAGGGCTATCTTACAGCCTATGTTGGAGAGAGAATGAAGCAGTTTGTGATCCCAATATCGTACTTGATGCAACCTTCGTTCCAAGACTTGTTGGGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCAAGGGTGGTCTTAAAATTCCTTGCAGCAAAGATGTTTTCCTAAGCACAACTTCACATTTGAATGGACTATAA 279 0.4301 MGFRLPGIRRASFAANQASSKAVEVPKGYLTAYVGERMKQFVIPISYLMQPSFQDLLGQAEEEFGYDHPKGGLKIPCSKDVFLSTTSHLNGL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00526 92 Pfam Auxin responsive protein 10 87 IPR003676 GO:0009733
Pumo8g00526 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00526 Pumo-Chr8 16331987 16332265 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00526 24 82 Calmodulin-binding Proteins AT3G43120 49.153 1.11e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00526 K14488 - gmx:113002386 158.688