Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00523 ATGCCTTTGTCTCTTTCAATTCCGATTCCAATTCCGATTCCAATCGCAATGGATTCTACGTCGGCCGTGACGGTGACGCAGATGGCGCTTTTCAAACCTCTGAAGCAGAAGCACCACCGTCATTTGGTCAGAGGCAGAGTCAGTGTTAGACCACTTCATCGCCGCCTCAACTCCGTTACGCCTTTGCGGTGCTCTTCCGCCGTCATTACTCTCCACGTCGGGGGAATGATGTGCGAGGGATGTGCAAATAGCGTCAAAAAAATTCTAGAAAGCCGACCACAAGTGTTATCTGCTCATGTAAATTTGACATCCGAGACAGCAGTTGTTTCCCCTGTACCTGAAGAGAAAACTGCACCAAATTACCTCAAGCAATTAGGGGAGGAACTTGCACAGCATCTAACTACCTGTGGTTTTGCTTCTACTCTTCAAGGTATGGGTTCAAGCTTCTCAACATATTGTTTCAATTGGTTTTCATTATGGTGTTCGATGTTGCAAATGTCACTATATTTGTTTTTATGA 519 0.4547 MPLSLSIPIPIPIPIAMDSTSAVTVTQMALFKPLKQKHHRHLVRGRVSVRPLHRRLNSVTPLRCSSAVITLHVGGMMCEGCANSVKKILESRPQVLSAHVNLTSETAVVSPVPEEKTAPNYLKQLGEELAQHLTTCGFASTLQGMGSSFSTYCFNWFSLWCSMLQMSLYLFL 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00523 172 ProSiteProfiles Heavy-metal-associated domain profile. 67 134 IPR006121 GO:0046872
Pumo8g00523 172 ProSitePatterns Heavy-metal-associated domain. 73 102 IPR017969 GO:0046872
Pumo8g00523 172 SUPERFAMILY HMA, heavy metal-associated domain 67 126 IPR036163 GO:0046872
Pumo8g00523 172 FunFam Copper-transporting ATPase PAA1, chloroplastic 67 142 - -
Pumo8g00523 172 Pfam Heavy-metal-associated domain 70 119 IPR006121 GO:0046872
Pumo8g00523 172 Gene3D - 65 145 - -
Pumo8g00523 172 CDD HMA 70 115 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00523 Pumo-Chr8 15984051 15986301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00523 65 141 Primary Pumps ATPases AT4G33520 67.532 6.49e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00523 - K17686 gmx:100527143 220.32