Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00521 ATGATGATAATACTAATTGTGCTCCGTCGTGGCACAGAAGGGTTCACCAAGAAACCCCGCACGCCACGTCACGGGAAGCACGCAGACAAAAAGGCTTCGAAGCAGCACGGGAACCCCTTCGATGTGGTACCTGAGGTGTGTCCTGAAGACACAAACTCGGATAGCGTGGAGGAGCTTCTTTTCAGAGTGCCCGTTTGCGCAACTCCTTCTTCGCCCGAACAAGCGGTGGTATCGGTAACCGATGAGGGGAGAGTCCTGTTTGGTTGTGAAAGCGCGTTTGAGATTGAGGAGTTTGCTGCTGATGTTAAGAGCTTGTTGGGTAAGGGGCTAGAGAGTGAGTGTGTGGGGTTGGAAGAGTTGGGTTTGGTTGGGACCAAAGAGGTGGAGGAGTATGCTTCGTATGTGAAGGTGGAAGAGGATGCGTATGAATTGGGATTTGGTTGTGATGATGAGTCCAATAATGTTGCGTTGGCATGTGAAGAGGTGAAGGAAAAGGTTATTATTGGGTTGGATGAGAAGTTTAAGAATGGTGGAGAAGTACTCAAAGAGAATGGTGAAGCAAAGAGGAAGAAGATGCTATTGTTGCGGTTAGATTATGAGGCTGTAATTACTGCTTGGGCAAGCCAAAAATCTCCGTGGACTACTGGTGATAAACCCGACTTGGGCACTCAGCAGTGCTGGCCTCATTGCATGTGTCACTATCCTTATGGTGAATTGGGTGGATTATTTGGGTGTCATTCAGCAATGGCAGATGGGGGAAGAGAAGCAAGAGTGTCAAGATATAGAGAAAAGCGACGAACAAGGTTGTTCTCGAAGAAAATAAGGTACGAGGTTCGAAAATTGAACGCCGAGAAGAGACCCAGAATGAAAGGGAGGTTCGTAAAGAGTGCTTCCTTAGTGGCACCACCGACTTTTCCTTTGCGAAACAAATAA 933 0.477 MMIILIVLRRGTEGFTKKPRTPRHGKHADKKASKQHGNPFDVVPEVCPEDTNSDSVEELLFRVPVCATPSSPEQAVVSVTDEGRVLFGCESAFEIEEFAADVKSLLGKGLESECVGLEELGLVGTKEVEEYASYVKVEEDAYELGFGCDDESNNVALACEEVKEKVIIGLDEKFKNGGEVLKENGEAKRKKMLLLRLDYEAVITAWASQKSPWTTGDKPDLGTQQCWPHCMCHYPYGELGGLFGCHSAMADGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKSASLVAPPTFPLRNK 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00521 310 Pfam CCT motif 254 296 IPR010402 GO:0005515
Pumo8g00521 310 ProSiteProfiles CCT domain profile. 254 296 IPR010402 GO:0005515
Pumo8g00521 310 MobiDBLite consensus disorder prediction 15 41 - -
Pumo8g00521 310 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 16 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00521 Pumo-Chr8 15704247 15706760 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00521 14 295 C2C2-CO-like Transcription Factor Family AT1G25440 38.462 3.00e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo8g00521 CCT 2.1e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00521 - - vun:114173052 345.51