Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00487 ATGGAGGCTACAGAAAACCTAAATGATCATTATATTATTGGCGAAGGAGCCCATGGAGTTGTTTATAAAGCCCTGATATGTCCTGACAAAGCTTTTGCTGTGAAGAAGATAGGATTTGCTGAGAGTGAAGGTGAGAAGTTGAGCATGGTCAGAGAAATTCAAACCCTTGGAAATATTAGGCATCGAAATCTGGTCAAATTGGAACACTTTTGGTTGAGAAAAGAATATGGTCTAATTTTGTACAGCTACATGCCAAATGGAAGTCTTCATGATGTTTTGCATGAAAAGACACCACCACCAACCTTAGAGTGGAATGTCCAGTATAAGATAGCTGTTGGAATTGCTCATGGATTGGCTTATCTCCATTATGATTGTGATCCTCTCATAGTGCACCGAGACATCAAGCCAAGCAATATACTTCTAGACTCTGATTTGGAGCCTCACATCTCTGACTTTGGTATTGCCAAACTTTTGGATCAGGCTTCTGCTTCAAATCCTTCCACTTCTGTGCAGGGTACAATTGGTTATATGGCACCAGAGAATGCTTATACAACAGCGAATAGTAGGGAGTCTGATGTATACAGTTACGGGGTAGTTTTGCTTGAGCTGATAACCAGAAAGAAGGCAGCAGCAGATCCTTCGTACATGGAAGGAACTGATGTAGTGGATTGGGTTAGGTCTGTGTGGACCGAAACAGGAGAAATTAATCAAATTGTTGATTCAAGCCTTGCAAAGGAATTTCCAGAAACCCGTATAATGAAAAAAGTTACCAAAGTGCTTATGGTGGGCTTTGAGATGTGCTGA 804 0.4104 MEATENLNDHYIIGEGAHGVVYKALICPDKAFAVKKIGFAESEGEKLSMVREIQTLGNIRHRNLVKLEHFWLRKEYGLILYSYMPNGSLHDVLHEKTPPPTLEWNVQYKIAVGIAHGLAYLHYDCDPLIVHRDIKPSNILLDSDLEPHISDFGIAKLLDQASASNPSTSVQGTIGYMAPENAYTTANSRESDVYSYGVVLLELITRKKAAADPSYMEGTDVVDWVRSVWTETGEINQIVDSSLAKEFPETRIMKKVTKVLMVGFEMC 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00487 267 SMART serkin_6 7 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00487 267 ProSitePatterns Protein kinases ATP-binding region signature. 13 36 IPR017441 GO:0005524
Pumo8g00487 267 Gene3D Transferase(Phosphotransferase) domain 1 84 266 - -
Pumo8g00487 267 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 1 83 - -
Pumo8g00487 267 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 2 266 - -
Pumo8g00487 267 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 84 267 - -
Pumo8g00487 267 ProSiteProfiles Protein kinase domain profile. 7 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00487 267 Pfam Protein kinase domain 10 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00487 267 SUPERFAMILY Protein kinase-like (PK-like) 3 249 IPR011009 -
Pumo8g00487 267 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Pumo8g00487 267 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00487 Pumo-Chr8 14438214 14439309 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00487 1 259 Receptor kinase-like Gene Family AT1G73080 55.472 3.35e-96 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo8g00487 Pkinase 4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00487 - - gmx:100778035 441.425