Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00477 ATGAAGGAAAAGACAAACAAGCTGTGGAGATTCCTCCTAGCATTCCTGATGCTCTTGATGGTAAGAGTGATGGTGTTGATGATGTGGAAGTGGAAACATTATTCTCTGTCAGGAAATCTCCTCCGGAAAATGGGAATGTTGCTTCTGATAAGATCTCTGGTGCTGGTGGCCTTGGAGAGGGCACTCCTAAGAGTGAGAGATCAGATGACAAGTTTTGTGATGATATATTTGGTGAGACACCAACTGGAGTTCAGAATTCAGGTAAAGAAGGTTTACTGGATTGAGAGGGGTGGCCTAAATGACAATTGGGATGATGCAGAGGGTTATTACAGTTATCGTTTTGGTGAAGTACTTGATGGCCGATATGAAGTCATCGCAGCTCATGGTAGGGGTGTCTTTTCAACAGTGGTCCGGGCAAAGAATCTTAAAAATAGTAATGGTGAACCCGAAGAAGTTGCCATAAAAATTATTCGTAGTAATGACACAATGTACAAGGCTGGTATGGATGAGTTAGTCATATTAAAGAAATTAGTAGGTGCTGATCCCGATGATAAGCGTCATTGTGTTCGTTTCCTTTCAAGTTTTAAGTACAGAAATCACCTTTGTTTAGTTTTTGAATCTCTCCATATGAATCTGCGTGAGGTTTTAAAGAAGTTTGGACGCAATATTGGCGTTAGGCTAACTGCAGTTAGGGCGTATGCTAAACAACTTTTTATTGCACTGAAGCATCTCCGGAACTGTGGTGTTCTCCATTGTGATATAAAGCCAGATAATATGTTGGTGAATGAGGCTAAAAATGTTTTGAAGCTTTGTGACTTTGGTAATGCCATGTTTGCTGGTAAAAATGAAGTTACACCATATCTTGTGAGTCGCTTTTATCGTGCCCCTGAAATCATACTTGGCTTACCCTATGATCATCCATTGGATATGTGGTCTGTAGGCTGTTGTTTGTATGAGCTCTATACAGGGAAAGTTCTTTTTCCAGGTTCTACTAACAATGACATGCTACGGCTCCACATGGAATTGAAGGGCCTTTTTCCAAAAAAGATGCTTCGTAAGGGAGCATTTATTGAACAGCATTTTGATCAGGACCTGAATTTTCTTGCTACCGAGGAGGACCCTATGACGAAAAAGGCTATAAAGCGGATGATTGTAAACATAAAGCCAAAAGATATTGGAACAATCATCACTGGCTCTCCAGGGGAGGATCCGAAGATGTTAGCCAATTTTAAGGATCTTCTGGAAAAAGTTTTTATATTGGATCCAGACAAGAGGTTGACAGTCTCACAGGCATTGAATCACCCATTCATCACTGGCAAGTGA 1323 0.4082 MKEKTNKLWRFLLAFLMLLMVRVMVLMMWKWKHYSLSGNLLRKMGMLLLIRSLVLVALERALLRVRDQMTSFVMIYLVRHQLEFRIQVKKVYWIERGGLNDNWDDAEGYYSYRFGEVLDGRYEVIAAHGRGVFSTVVRAKNLKNSNGEPEEVAIKIIRSNDTMYKAGMDELVILKKLVGADPDDKRHCVRFLSSFKYRNHLCLVFESLHMNLREVLKKFGRNIGVRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLPYDHPLDMWSVGCCLYELYTGKVLFPGSTNNDMLRLHMELKGLFPKKMLRKGAFIEQHFDQDLNFLATEEDPMTKKAIKRMIVNIKPKDIGTIITGSPGEDPKMLANFKDLLEKVFILDPDKRLTVSQALNHPFITGK 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00477 440 CDD STKc_PRP4 121 437 IPR044092 GO:0004674|GO:0006468|GO:0045292
Pumo8g00477 440 PANTHER DUAL SPECIFICITY PROTEIN KINASE 99 438 - -
Pumo8g00477 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Pumo8g00477 440 FunFam serine/threonine-protein kinase PRP4 homolog 93 181 - -
Pumo8g00477 440 Gene3D Phosphorylase Kinase; domain 1 92 181 - -
Pumo8g00477 440 FunFam Serine/threonine-protein kinase PRP4 homolog 182 438 - -
Pumo8g00477 440 Pfam Protein kinase domain 123 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00477 440 Gene3D Transferase(Phosphotransferase) domain 1 182 438 - -
Pumo8g00477 440 ProSiteProfiles Protein kinase domain profile. 122 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00477 440 SMART serkin_6 122 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00477 440 SUPERFAMILY Protein kinase-like (PK-like) 109 439 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00477 Pumo-Chr8 14248753 14255272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00477 107 439 MAP Kinase Gene Family AT2G18170 30.286 2.93e-30 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Pumo8g00477 Pkinase 2.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00477 K08827 - gmx:100784523 671.389