Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00457 ATGGCTGCTTCATCAATCATCATGGAAGCTAGTTCAGGTTCGGATCTGACTCCTCTTCTCCCCGATAATGACAATAACTCTGCTGAAAACAGTGGTGAAAAACAGTATTACCAGAAACAACTTGATACCCTCAAATTGTTTGAGGAAGCAGACACCATGGTGTCTACTGATTGCATGGTTGAGGAAGACGGTGAAGAAGAAGCTCGACAAGAAAGAGCCATGAAGATCTCTAATTATGCAAATGTCATTTTATTGATATTAAAGATTTATGTTACCATAAAAAGTGGGTCAATGGCCCTAGTAGCATCAACGTTGGATTTTCTGATGGACCTGATGGCTGGTGGCGTACTTTGGTTTGCCCACCTAGCAATGAAAGATGTAAATATCTATAAATACCCAATTGGGAAGCTCCGAGTGCAGCCAGTTGGAATTACCATCTTTGCAGCAGTGATGGCAACACTTGGCTTTGTGGTGTTAATCACGGCTGTAAAACAGCTAATAGAAAGCAGTGATGCTGAAAAGATGACTGCTGAACAATTAATATGGCTGTATTCTACTATGATATTTGCAATTGTGGTGAAGTTTATGCTCTGGCTTCACTGTAGAAGCTCAGGAAACAAGCTAGTCCAAGCCTATGCAGATGACCACTACTTTGATGTTATAACAAACGTGGCTGGGTTAGCTGCAGCTGCTCTTGGTGATAAATATTACTGGTGGATAGACCCGGTTGGAGCTATTTTACTGGCAATATACACAATTAGAAATTGGTCCTGCACTGTGATGGAAAATGCAGTCTCACTGGTGGGACAATCTGCACTTCCAGAAGTTTTGCAAAAGCTGACATATATTGCTATAAGGCACCCTCAAATCAAGCGCATTGACACTGTCCGCGCATACACATTTGGGGTTCTATATTTTGTGGAGGTTGACATTGAACTGCCGGAAGATTTACCCTTAAAAGAAGCGCACAATATTGGAGAGAGCCTACAGATAAAGCTCGAGAAACTTCCAGAAGTTGAGCGGGCATTTGTCCATTTAGACTTTGAATGTTTTCAGTGTAGCAGACTCTGGCCACTTGAATTTGCTACCCTAGCTTCTGCATTTGCTACAGCTGTGCCATATCTAGACAAGACAGATTTTCTAAAGCTTCAGAATGGCAGGTGGTCAATTATAGTTGTTCAGTTGCCAGGCAGGACTGACAATGATATCAAGAACTATTGGAACACCAAGCTTAAGAGGAAACTCATGGGGTTGCTTCCTGCATCTTATTAA 1272 0.419 MAASSIIMEASSGSDLTPLLPDNDNNSAENSGEKQYYQKQLDTLKLFEEADTMVSTDCMVEEDGEEEARQERAMKISNYANVILLILKIYVTIKSGSMALVASTLDFLMDLMAGGVLWFAHLAMKDVNIYKYPIGKLRVQPVGITIFAAVMATLGFVVLITAVKQLIESSDAEKMTAEQLIWLYSTMIFAIVVKFMLWLHCRSSGNKLVQAYADDHYFDVITNVAGLAAAALGDKYYWWIDPVGAILLAIYTIRNWSCTVMENAVSLVGQSALPEVLQKLTYIAIRHPQIKRIDTVRAYTFGVLYFVEVDIELPEDLPLKEAHNIGESLQIKLEKLPEVERAFVHLDFECFQCSRLWPLEFATLASAFATAVPYLDKTDFLKLQNGRWSIIVVQLPGRTDNDIKNYWNTKLKRKLMGLLPASY 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00457 423 NCBIfam cation diffusion facilitator family transporter 71 347 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pumo8g00457 423 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 386 415 IPR017930 -
Pumo8g00457 423 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 28 350 - -
Pumo8g00457 423 Gene3D Cation efflux protein, cytoplasmic domain 270 348 IPR036837 -
Pumo8g00457 423 SUPERFAMILY Homeodomain-like 383 415 IPR009057 -
Pumo8g00457 423 SUPERFAMILY Cation efflux protein transmembrane domain-like 69 269 IPR027469 -
Pumo8g00457 423 Gene3D Cation efflux protein transmembrane domain 70 267 IPR027469 -
Pumo8g00457 423 CDD SANT 382 411 IPR001005 -
Pumo8g00457 423 Gene3D - 362 418 - -
Pumo8g00457 423 FunFam Metal tolerance protein 4 275 355 - -
Pumo8g00457 423 Pfam Dimerisation domain of Zinc Transporter 275 347 IPR027470 -
Pumo8g00457 423 FunFam Metal tolerance protein 4 73 267 - -
Pumo8g00457 423 Pfam Cation efflux family 76 268 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pumo8g00457 423 MobiDBLite consensus disorder prediction 1 35 - -
Pumo8g00457 423 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 274 348 IPR036837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00457 Pumo-Chr8 13802510 13809545 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00457 387 417 MYB Transcription Factor Family AT5G57620 87.097 3.31e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00457 - - gmx:100785952 524.628