Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00456 ATGGAGGAAGAAATGCGGTTGATGAAAGAGCAGTTACAGATGCTGTTGGACAACCGGAATGGAGGCAGTTCGACGGGTACTAGTCAAGTGCACCCTTATTATGCTGAGGACTTGGATGACCAGCCACTGGATGACAAGAGCCCCTCAGCTCGTCAACACCGACGAGGGAGTATATTTTTCTCCTCCGGTATCTTCGTGTATGCTAATCTTTCATGTATACACCAAGATTCTAGAGTGTGGTTGGGTAGATTAGGAGTCTCCTCTGCTGGTAAGAATAAACAAAAGAATGTGGGTGGTGAAGGAAGAAACAGAAGGGTGCTTAATGATATTGGGAATCTTGTTGCTGCAACAAAGGTGGAAGCAGCTCAGAAGGTTAAAGAAGAACCTGAAGTGATTGTCATTAGCTCTGATGATGAATGGCAAGAAGAGAAGCAGAAGCAAGCCGTTAAAGGAAAAAAGGCAAGGGAAATGTCTTCCAGGAAAAATGCAAAGGCATTCAGTTCAGTCCTCTCTGCTCGAAGCAAGGATGTTCCTTTGTTCTTTTTTCTTCATTTTTGGAATGTGATTTGGGACTTAGGGATGGACAATGAATTGGCAGCAGCCAAGTATATCGATGATATTTATAAATTTTACAAAGAGAACGAAGAAGATGGCTGTGTGCATGATTACGTGGGTTCACAGCCAGATATTAATGCCGAGATGAGATCAATCCTTGTGGACTGGTTGATAGAAGCCGTGTCAAGAAGGGAACTTCAGCTGGTTGGCATCAGCTCAATGCTGATAGCCTCAAAATATGAAGAGATATGGGCACCACAGGTTAATGATTTTGTGTGCTTATCAGACAATGCTTATATTAGTGAACAAGTGTTGATGATGGAGAAAACAATTCTTAGGAAGCTTGAATGGTGCTTAACAGTTCCAACACCCTATGTCTTTTTGGTTTGGTATATCAAAGCCTCCACTCCACCTGTTAAAGAGATGGAACACATGGCATTTTTCCTTGCTGAACTTTCTTTGATGAACTATCCTACTGCAATCCAGTACCGGCCTTCTCTGATTGCTGCTTCTGCTGTATTTGTGGCTCGATGTACCCTTGGAAGGAGCCCTTTCTGGACAAGCACTTTGGTGGATTACACAGGCTACACTGAGGAGCAGCTAAGTGATTGTGCCAAAATCATGGTCAACCTTCATGCTGCTGCTCCAGGAAGTAAGCTTAGGGCAGTTTACGAGAAATTATGTGGCTCAGTCAGATCTTTGTGCTGTTGCTCTTCTTTCTCCAGTGAAGAACTTGTCAAAATTGTCTTGAACATTCTAGTTTTGGTTTGTGTGATCTTGTCATTTGTTAGAGTATAG 1353 0.4287 MEEEMRLMKEQLQMLLDNRNGGSSTGTSQVHPYYAEDLDDQPLDDKSPSARQHRRGSIFFSSGIFVYANLSCIHQDSRVWLGRLGVSSAGKNKQKNVGGEGRNRRVLNDIGNLVAATKVEAAQKVKEEPEVIVISSDDEWQEEKQKQAVKGKKAREMSSRKNAKAFSSVLSARSKDVPLFFFLHFWNVIWDLGMDNELAAAKYIDDIYKFYKENEEDGCVHDYVGSQPDINAEMRSILVDWLIEAVSRRELQLVGISSMLIASKYEEIWAPQVNDFVCLSDNAYISEQVLMMEKTILRKLEWCLTVPTPYVFLVWYIKASTPPVKEMEHMAFFLAELSLMNYPTAIQYRPSLIAASAVFVARCTLGRSPFWTSTLVDYTGYTEEQLSDCAKIMVNLHAAAPGSKLRAVYEKLCGSVRSLCCCSSFSSEELVKIVLNILVLVCVILSFVRV 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00456 450 Gene3D - 206 219 - -
Pumo8g00456 450 Gene3D - 299 439 - -
Pumo8g00456 450 Gene3D - 247 298 - -
Pumo8g00456 450 Gene3D - 220 245 - -
Pumo8g00456 450 Pfam Cyclin, N-terminal domain 245 304 IPR006671 -
Pumo8g00456 450 PANTHER CYCLINS 155 245 IPR039361 -
Pumo8g00456 450 SMART Cyclin_C_2 307 429 IPR004367 -
Pumo8g00456 450 FunFam G2/mitotic-specific cyclin-1 295 420 - -
Pumo8g00456 450 SMART cyclin_7 311 395 IPR013763 -
Pumo8g00456 450 SMART cyclin_7 202 298 IPR013763 -
Pumo8g00456 450 Pfam Cyclin, C-terminal domain 307 412 IPR004367 -
Pumo8g00456 450 SUPERFAMILY Cyclin-like 195 304 IPR036915 -
Pumo8g00456 450 SUPERFAMILY Cyclin-like 306 415 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00456 Pumo-Chr8 13778500 13783027 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00456 89 411 Core Cell Cycle Gene Families AT2G26760 46.685 1.05e-100 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00456 K21777 - gmx:100801274 450.284