Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00455 ATGGAAAATGCAGTCTCACTGGTGGGACAATCTGCACCTCCTGAAGTTTTGCAAAAGCTGACATATATTGCTATAAGGCACCCTCAAATCAAGCGCATTGACACTGTCCGCGCATACACATTTGGGGTTCTATATTTTGTGGAGGTTCACATTGAACTGCCGGAAGATTTACCCTTAAAAGAAGCGCACAATATTGGAGAGAGCCTACAGATAAAGCTCGAGAAACTTCCAGAAGTTGAGCGGGCATTTGTCCATTTAGACTTTGAATGTTTTCAGTGTAGCGGACTCTGGCCACTTGAATTTGCTACCCTAGCTTCTGCATTTGCTACAGCTGTGCCATATCTAGACAAGATAGATTTTCTAAAGCTTCAGAATGGCAGGTGGTCAATTATAGTTGTTCAGTTGCCAGGCAGGACTGACAATGATATCAAGAACTATTGGAACACCAAGCTTAAGAGGAAACTCATGGGGTTGCTTCCTGCATCTTATTAA 492 0.4289 MENAVSLVGQSAPPEVLQKLTYIAIRHPQIKRIDTVRAYTFGVLYFVEVHIELPEDLPLKEAHNIGESLQIKLEKLPEVERAFVHLDFECFQCSGLWPLEFATLASAFATAVPYLDKIDFLKLQNGRWSIIVVQLPGRTDNDIKNYWNTKLKRKLMGLLPASY 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00455 163 FunFam Metal tolerance protein 4 15 94 - -
Pumo8g00455 163 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 11 88 IPR036837 -
Pumo8g00455 163 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 126 155 IPR017930 -
Pumo8g00455 163 CDD SANT 122 151 IPR001005 -
Pumo8g00455 163 Gene3D Cation efflux protein, cytoplasmic domain 10 88 IPR036837 -
Pumo8g00455 163 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 1 90 - -
Pumo8g00455 163 Gene3D - 98 159 - -
Pumo8g00455 163 Pfam Dimerisation domain of Zinc Transporter 13 87 IPR027470 -
Pumo8g00455 163 SUPERFAMILY Homeodomain-like 122 155 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00455 Pumo-Chr8 13716840 13721561 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00455 127 157 MYB Transcription Factor Family AT5G57620 87.097 1.86e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00455 - - lbb:132604612 169.474