Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00453 ATGGAACACATGGCATTTTTCCTTGCTGAACTTTCTTTGATGAACTATCCTACTGCAATCCTGTACCGGCCTTCTCTGATTGCTGCTTCTGCTGTATTTGTGGCTCGATGTACCCTTGGAAGGAGCCCTTTCTGGACAAGCACTTTGGTGGATTACACAGGCTACACTGAGGAGCAGCTAAGCGATTGTGCCAAAATCATGGTCAACCTTCATGCTGCTGCTCCAGGAAGTAAGCTTAGGGCAGTTTACGAGAAATTTTGTGGCTCAGTCAGATCTTTGTGCTGTTGCTCTTCTTTCTCCAGTGAAGAACTTGTCAAAATTGTCTTGAACATTCTAGTTTTGGTTTGTGTGATCTTATCATTTGTTAGAGTATAG 375 0.4347 MEHMAFFLAELSLMNYPTAILYRPSLIAASAVFVARCTLGRSPFWTSTLVDYTGYTEEQLSDCAKIMVNLHAAAPGSKLRAVYEKFCGSVRSLCCCSSFSSEELVKIVLNILVLVCVILSFVRV 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00453 124 Pfam Cyclin, C-terminal domain 1 87 IPR004367 -
Pumo8g00453 124 SUPERFAMILY Cyclin-like 1 91 IPR036915 -
Pumo8g00453 124 SMART Cyclin_C_2 1 103 IPR004367 -
Pumo8g00453 124 Gene3D - 1 110 - -
Pumo8g00453 124 SMART cyclin_7 1 69 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00453 Pumo-Chr8 13694134 13694825 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00453 1 86 Core Cell Cycle Gene Families AT2G26760 50.000 1.06e-25 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00453 K21777 - gmx:100801274 158.303