Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00452 ATGGCTTCAAGAGCGGAACAACCCATCAATGTAGGTAAGAATAAACAGAAGAATGTGGGTGGTGAAGGAAGAAACAGAAGGGTGCTTAATGATATTGGGAATCTTGTTGCTGCAACAAAGGTGGAAGCAGCTCAGAAGGTTAAAGAAGAACCTGAAGTGATTGTCATTAGCTCTGATGATGAATGGCAAGAAGAGAAGCAGAAGCAAGCCGTTAAAGGAAAAAAGGCAAGGGAAATGTCTTCCAGGAAAAATGCAAAGGCATTCAGTTCAGTCCTCTCTGCTCGAAGCAAGGAAGATGGCTGTGTGCATGATTACGTGGGTTCACAGCCAGATATTAATGCCGAGATGAGATCAATCCTTGTGGACTGGTTGATAGAAGTGCATAGAAAGCTTGAGCTCATGCCAGAAACGTTATTTGACTCTGAACATTGTTGA 435 0.4299 MASRAEQPINVGKNKQKNVGGEGRNRRVLNDIGNLVAATKVEAAQKVKEEPEVIVISSDDEWQEEKQKQAVKGKKAREMSSRKNAKAFSSVLSARSKEDGCVHDYVGSQPDINAEMRSILVDWLIEVHRKLELMPETLFDSEHC 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00452 144 Pfam Cyclin, N-terminal domain 96 139 IPR006671 -
Pumo8g00452 144 SUPERFAMILY Cyclin-like 101 139 IPR036915 -
Pumo8g00452 144 MobiDBLite consensus disorder prediction 1 25 - -
Pumo8g00452 144 Gene3D - 101 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00452 Pumo-Chr8 13692871 13693841 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00452 12 139 Core Cell Cycle Gene Families AT2G26760 39.286 9.58e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00452 K21777 - gmx:100801274 152.525