Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00426 ATGTATCAACATCTTGCACACAAGTTAAGGACTTGTCTTGCTAAAAGATTTTTCTCAAACACTCATTCCATAATAAATAGTAGATCCTTGCATTCATCTCCAGGTGTGACTAACAGCATGTCGAGCAGTGCTGGTCTTGTGATCCCATGCAAAGCTGCTGTTGCATGGGAAGCAGGGAAACCTTTGGTTATAGAACGTGTGGAGGTGGCTCCTCCACAGGCCATGGAAGTGAGGATCAAAGTCAAATATACCTCACTTTGCCATACAGATCTTTACTTTTGGGAGGCCAAGGGGCAAACTCCTTTGTTTCCACGAATTTTCGGCCATGAGGCAGCTGGAATTGTGGAGAGTGTTGGAGAAGGAGTCTCAGATCTGTGTGTTGGGGATCATGTGCTCCCCGTGTTCACCGGGGAATGTGGTGAGTGTGCACATTGCAAATCTGAGGAAAGCAACATGTGTGACCTGTTGAGAATTGATACAGACAGAGGAGTCATGCATAGTGATGGTAGGACCAGGTTCTCCATTAATGGTACCCCAATAAACCACTTTGTTGGCACATCCACTTTTAGTGAATACACTGTGGTACATGCTGGCTGCCTAGCAAAGATCAATCCACAAGCACCTATGGATAAAGTCTGTGTCCTCAGTTGTGGCATCTCAACAGGATTAGGAGCAACTTTAAATGTAGCAAAACCAAATAAGGGCTCTACAGTAGCAGTCTTTGGTCTTGGAGCTGTTGGCCTTGCTGCTGCTGAGGGAGCAAGAATTGCTGGTGCATCTAGAATTATTGGAATTGATTTGAACCCAAACAGATTTGAGGAAGCCAAAAAATTTGGAGTAACTGAGTTCCTGAATCCCAAGGACTATGATAAACCAGTTCAAAAGGTTATTGCAGAAATAACGAATGGAGGAGTGGATAGAAGTATAGAGTGCACTGGAAACATCAATGCTATGATATCCGCTTTTGAATGTGTTCATGATGGTTGGGGTGTTGCTGTGCTTGTTGGAGTACCCAACAAGGATGCAGTATTCATGACCAAGCCAATTAATGTGCTCAATGAAAGAACACTCAAGGGAACTTTCTTTGGAAATTACAAGCCTAGGACTGACCTCCCTTCTGTTGTTGAAATGTATATGAACAAGAAATTGGAACTGGACAAGTTTATAACCCATAGAGTTCCTTTCTCTGATATCAACAAGGCATTTGAGTTAATGTTGAAAGGAGAGGGACTAAGGTGCATCATTAGCATGGAAGACTAG 1260 0.4325 MYQHLAHKLRTCLAKRFFSNTHSIINSRSLHSSPGVTNSMSSSAGLVIPCKAAVAWEAGKPLVIERVEVAPPQAMEVRIKVKYTSLCHTDLYFWEAKGQTPLFPRIFGHEAAGIVESVGEGVSDLCVGDHVLPVFTGECGECAHCKSEESNMCDLLRIDTDRGVMHSDGRTRFSINGTPINHFVGTSTFSEYTVVHAGCLAKINPQAPMDKVCVLSCGISTGLGATLNVAKPNKGSTVAVFGLGAVGLAAAEGARIAGASRIIGIDLNPNRFEEAKKFGVTEFLNPKDYDKPVQKVIAEITNGGVDRSIECTGNINAMISAFECVHDGWGVAVLVGVPNKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVEMYMNKKLELDKFITHRVPFSDINKAFELMLKGEGLRCIISMED 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00426 419 Pfam Alcohol dehydrogenase GroES-like domain 76 202 IPR013154 -
Pumo8g00426 419 Gene3D - 58 409 - -
Pumo8g00426 419 FunFam alcohol dehydrogenase 1-like isoform X1 58 221 - -
Pumo8g00426 419 PANTHER ALCOHOL DEHYDROGENASE 47 415 - -
Pumo8g00426 419 FunFam Alcohol dehydrogenase class-P 222 360 - -
Pumo8g00426 419 SUPERFAMILY GroES-like 44 226 IPR011032 -
Pumo8g00426 419 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 108 122 IPR002328 GO:0008270|GO:0016491
Pumo8g00426 419 CDD alcohol_DH_plants 48 415 - -
Pumo8g00426 419 Gene3D - 222 360 - -
Pumo8g00426 419 Pfam Zinc-binding dehydrogenase 245 373 IPR013149 -
Pumo8g00426 419 SUPERFAMILY GroES-like 367 415 IPR011032 -
Pumo8g00426 419 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 208 382 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00426 Pumo-Chr8 12927424 12933229 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00426 40 409 Monolignol Biosynthesis Gene Families AT1G72680 23.421 2.84e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00426 K18857 - egr:104426870 682.559