Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00385 ATGGATACTGAAATTGAAAGCATTGACATGGCCGATATCAGAGTTGATGCAAGAAGTTTTAGTTGGGCAGTGGACAGTGCGATAAGGAGTGAGACTGGGTCAAATTTGGGAGAATCCCGAGTCTCTCGTTTTGCTTTGGTAGTGGACAGTGCCATAAGGAGTTGGACTGGGTCAACTTGGAGAACATCTCGTGTCCGTAGTTTTGCCTCAGCGGTGGACAATGCGATAAGTAGCAGGACAACATCAATTTTGGAAACATCCCCTTCCCCTGTGCATGGTTTTGGTTTTGCGTCGACAGTGGACAGGAGGACTGCTGCTGCACGATTATTCACCCTCGCTGAGCTTAAAGCAGCCATCAACAACTTTTCACTTCTTGACAACAAGATTGGTGCTGGTGAAGTGTACAGAGGCAAACTCGATGATGGTCGTGAGGTTGCAATCAAAAGGGATAAAATCTTGTGGAGGAAAACGTCTGACTTGGCCTTCTTGTCCGGTTTACACCACAAGAACTTGGTTGGGCTGGTTGGGTTCTGTGAAGAGAAAGATGAAAGGCTCTTGGTGTATGAGTATATGAAGAATGGGTCGTTGTACGATCATTTGCATGGCAAGGTTAGCAGTGTGTTGAATTCGTGGAAAATGAGGATCGAAATTGCTTTGGATGCTTCCCGGGGAATAGAACATCTTCATAATGATGGAGTTCCATCTATTATTCACAGAAATATTAAATCTTTCAACATTCTTCTTGACGCCACTTGGACGGCAAGAGTATCTGATTTTGAATTGTCGTTCATGAGTCCAGAACCTGACCTTGATTGCCAAGATGCAGTGGTGGGAACCTTTGGATACATTGATCCTGAGTACTCTCGCCGAAGTGTGGTGACAGAAAAGATTGATGTGTATGGGTTTGGAGTGGTACTGCTTGAACTTTTAACCGGAAAGAAACCTATATTCAAGTCTGGAGAAGAAGGAAGCTCCCCATTAAGTGTGGTGGACTTAGCAGTGCCTGCTATTTTGGCTGGATATTTGGTGAAAATTTTGGATCCAAGCGTTCGGCCACCGGATGTGAAGGAAGCAGAGGCTCTGGAGTTAGTGGCCAATACAGCTATCAAATGTGTGAATTTGAAAGGGAAATATAGACCAACTATGGCTGAAATTGTGGTCAATTTGGAGTGGGCTTTGGATGCGACACTGATAACCATCTAG 1203 0.4472 MDTEIESIDMADIRVDARSFSWAVDSAIRSETGSNLGESRVSRFALVVDSAIRSWTGSTWRTSRVRSFASAVDNAISSRTTSILETSPSPVHGFGFASTVDRRTAAARLFTLAELKAAINNFSLLDNKIGAGEVYRGKLDDGREVAIKRDKILWRKTSDLAFLSGLHHKNLVGLVGFCEEKDERLLVYEYMKNGSLYDHLHGKVSSVLNSWKMRIEIALDASRGIEHLHNDGVPSIIHRNIKSFNILLDATWTARVSDFELSFMSPEPDLDCQDAVVGTFGYIDPEYSRRSVVTEKIDVYGFGVVLLELLTGKKPIFKSGEEGSSPLSVVDLAVPAILAGYLVKILDPSVRPPDVKEAEALELVANTAIKCVNLKGKYRPTMAEIVVNLEWALDATLITI 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00385 400 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 82 395 IPR044815 GO:0004674
Pumo8g00385 400 SUPERFAMILY Protein kinase-like (PK-like) 106 390 IPR011009 -
Pumo8g00385 400 Gene3D Phosphorylase Kinase; domain 1 97 190 - -
Pumo8g00385 400 ProSiteProfiles Protein kinase domain profile. 120 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00385 400 Gene3D Transferase(Phosphotransferase) domain 1 191 397 - -
Pumo8g00385 400 Pfam Protein kinase domain 131 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00385 Pumo-Chr8 11991082 11992978 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00385 107 394 Receptor kinase-like Gene Family AT3G55950 57.278 2.62e-99 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pumo8g00385 Pkinase 1.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00385 - - gmx:100804497 402.905