Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00384 ATGGAATTGGATAGTGAGATTGTTGGGAGCATTGACATGGCCGATAATATCACAGAAAGTTTTAGTTGGGCTTGGGTAGTGGACAATGCGATAAGGAGTAGGAGTCCGTCAATTTTGGGAGCATCCCCTGTCCATAGTTTTCGTTCGGTAGTGGACAGTGCCATAAGGAGTAGGACTCCCTCAAATTTGGGAACATCCCCTTCCCCTCTCCATCCTTTTGCTTCGGCACTGAACGTGAACGCTATTGCTGCACCTGCACGATTGTCACAAGTGGAAGGGGTGTCCAATGCCACAAGATATGTTGCTCCACAATTATTCACCCTGGCTCAGCTTCAAAAAGCCACCAACAAATTCTCACGTCACAACAAGATACGTGATGATGAGTACAGAGGCAAACTCGTTGATGGTCGTGAGGTCACAATCCGGAGGGAAAAAATGACGCGTTACTTGTCTGATTTTGGTAAGCGTGAATTTGCCATCTGGTCCCGTTTACAGCACAGGAACTTGGTTAGGCTGGTTGGGTACTGTGAAAAGAAAGATGAAAGGCTCTGGGTGTATGAGTATATGAAGAATGGGTCGTTGTATGATCATTTGCATGACGAGGGTAGCAGTACTAGTGTGTTGAATTCGTGGAAAATGAGGATCAAAATTGCTTTGGATGCTTCTCGGGGAATACAATACCTTCATAATTATGCAGTTCCATCTATTATTCACAGAGATATCAAGTCTAGCAACATTCTTCTTGATGCCACTTGGACGGCATGTGTATTTGATTTTAAAGCGTCGTTGATGAGTCCAGAACCTGACCATGAACACGATGAGGTGGTAGTTGGAACCTTTGGATACGTTGATCCGGAGTACTTCCTGACGGGTAAGGTGACAGCAAAGAGTGATGTGTATGGGTTTGGAATTGTACTGCTTGAACTTCTAACGGGAAAGAAAGTTTTAATCGACTCTAAGGGCAAACTGGTGGAGTTTGCAGTGCCTGCTATTTTGGATGGAGATTTGGTCGAAATTTTGGATCCAAGGGTTGGACCACCCGATGTGAATGAAGCACAGGCACTGGAGTTACTGGCCTATACCGCTATCTGTTGTGTGAAATGGGAAGGGAATGATAGACCAACCATGGTTGACGTTGTGGTCAATTTGGAGCGGGCCTTGGCTATTTGTGATAGTAACTCCTATGATGAGAATTTTTCCTCTCCACTGCTGGAATTTTCCACAACACCTGTGGATCGTTTTCTCTTCTTCCAGAAATTTTCAATTGATGGAGAGGAGTCGGACTCATATTCTGATGTTTCAGAATGA 1308 0.4465 MELDSEIVGSIDMADNITESFSWAWVVDNAIRSRSPSILGASPVHSFRSVVDSAIRSRTPSNLGTSPSPLHPFASALNVNAIAAPARLSQVEGVSNATRYVAPQLFTLAQLQKATNKFSRHNKIRDDEYRGKLVDGREVTIRREKMTRYLSDFGKREFAIWSRLQHRNLVRLVGYCEKKDERLWVYEYMKNGSLYDHLHDEGSSTSVLNSWKMRIKIALDASRGIQYLHNYAVPSIIHRDIKSSNILLDATWTACVFDFKASLMSPEPDHEHDEVVVGTFGYVDPEYFLTGKVTAKSDVYGFGIVLLELLTGKKVLIDSKGKLVEFAVPAILDGDLVEILDPRVGPPDVNEAQALELLAYTAICCVKWEGNDRPTMVDVVVNLERALAICDSNSYDENFSSPLLEFSTTPVDRFLFFQKFSIDGEESDSYSDVSE 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00384 435 Gene3D Phosphorylase Kinase; domain 1 82 188 - -
Pumo8g00384 435 Pfam Protein kinase domain 155 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00384 435 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 104 397 IPR044815 GO:0004674
Pumo8g00384 435 ProSiteProfiles Protein kinase domain profile. 107 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00384 435 Gene3D Transferase(Phosphotransferase) domain 1 189 400 - -
Pumo8g00384 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Pumo8g00384 435 SMART serkin_6 105 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00384 435 SUPERFAMILY Protein kinase-like (PK-like) 96 383 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00384 Pumo-Chr8 11985994 11987301 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00384 90 390 Receptor kinase-like Gene Family AT3G55950 51.818 6.15e-97 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pumo8g00384 Pkinase 4.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00384 - - gmx:100787718 470.314