Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00373 ATGACCAAACCCAACACTTTCTTTCACAATCTCATCAAGCCCTTCAAATTCAGCTCCAGCAAAGAGGGACAAAGCGAAGAAGACGAAATACAGAACATAGCTGCACAGGAGCAGAAGGTCTTCCCCTACCAAACATTGGTTGCTGCTACCAACAAATTTCACATTCTTAACAAGCTAGGTGAAGGAGGATTTGGACCCACTTATTCTAATTTTTGGGGATTTTTTTTATTATTTTTTATTGTGAAGGGGAAATTGGATGATGGGAGAGAGATTGCGGTGAAGAAGTTATCGCATAGATCGAATCAAGGGAAGACACAGTTCATTAACGAGGCAAAGTTGTTGGCACGTGTGCAGCACCGTAATGTGGTGAATTTGTTCGGTTATTGTGCCCAAGGCTCCGAGAAGCTTCTTGTTTACGAATATGTCCCTCGCGAGAGCCTCGACAAGTTTCTTCTCAAATCCCAGAAGAAAGAACAGCTAGATTGGAAACGTAGATTTGACATAATCACAGGGGTGGCAAGAGGGTTGCTTTATCTTCACGAAGATTCTCACAATTGCATTATTCATCGCGACATAAAGGCCAGTAACATCTTACTCGATGAAAAATGGGTTCCCAAGATTGCAGATTTTGGCCTCGCACGCCTCTTCCCCGAAGACCAAACCCACGTCAACACACGTGTGGCTGGAACCAACGGCTATTTGGCTCCGGAGTATTTAATGCATGGACATTTATCTGTGAAGGCTGACGTATTTAGCTATGGGGTTTTGGTGTTGGAATTGGTCAGTGGCCAGCGAAATTCATCGTTTGATATGGACGTCAGTGCACAGAATCTCCTGGACTGGGCATACAGGCTATACAAGAAAGGGAGGGCCCTAGAAATCGTGGACCCTACACTGGCCTCTTCAGTGGCAACCGAACAAGCAGAAATGTGCATTCAACTGGGTCTGCTCTGCACTCAAGGCGAACCACAACTGCGTCCAACCATGGGGCGTGTGATGGTGATCCTGTCAAAGAAACCAGGCCACATGGAAGAACCAACGAGGCCGGGAATACCCGGTTCCAGATACAGAAGAGTGTCTCGCAGACCCTATGCAATGTCTTCTGGGGAAGTTGATGATGACTCTAATTTGCACACTTTTGATTCTTCAAGCAACTATGGCACTAACACTACTTCTTCTGCAACAACAAGCTCCAATGCTACCGCAGAAGTAGACCGGCGAGGGAAACGACCAATGCAAGGTTAG 1245 0.4618 MTKPNTFFHNLIKPFKFSSSKEGQSEEDEIQNIAAQEQKVFPYQTLVAATNKFHILNKLGEGGFGPTYSNFWGFFLLFFIVKGKLDDGREIAVKKLSHRSNQGKTQFINEAKLLARVQHRNVVNLFGYCAQGSEKLLVYEYVPRESLDKFLLKSQKKEQLDWKRRFDIITGVARGLLYLHEDSHNCIIHRDIKASNILLDEKWVPKIADFGLARLFPEDQTHVNTRVAGTNGYLAPEYLMHGHLSVKADVFSYGVLVLELVSGQRNSSFDMDVSAQNLLDWAYRLYKKGRALEIVDPTLASSVATEQAEMCIQLGLLCTQGEPQLRPTMGRVMVILSKKPGHMEEPTRPGIPGSRYRRVSRRPYAMSSGEVDDDSNLHTFDSSSNYGTNTTSSATTSSNATAEVDRRGKRPMQG 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00373 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Pumo8g00373 414 CDD STKc_IRAK 59 338 - -
Pumo8g00373 414 Gene3D Transferase(Phosphotransferase) domain 1 142 346 - -
Pumo8g00373 414 Gene3D Phosphorylase Kinase; domain 1 15 141 - -
Pumo8g00373 414 Pfam Protein tyrosine and serine/threonine kinase 54 332 IPR001245 GO:0004672|GO:0006468
Pumo8g00373 414 FunFam Cysteine-rich receptor-like protein kinase 10 16 141 - -
Pumo8g00373 414 FunFam Cysteine-rich receptor-like protein kinase 10 143 348 - -
Pumo8g00373 414 SMART serkin_6 53 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00373 414 SUPERFAMILY Protein kinase-like (PK-like) 38 347 IPR011009 -
Pumo8g00373 414 ProSiteProfiles Protein kinase domain profile. 53 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00373 414 MobiDBLite consensus disorder prediction 339 414 - -
Pumo8g00373 414 MobiDBLite consensus disorder prediction 378 402 - -
Pumo8g00373 414 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00373 Pumo-Chr8 11777599 11783139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00373 25 350 Receptor kinase-like Gene Family AT4G11530 48.171 4.14e-106 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo8g00373 PK_Tyr_Ser-Thr 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00373 - - gmx:100811523 722.62