Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00369 ATGACATGTGACATCCTAACTAATACTATGCTTCATCATCATATCATCCCATACATGACCCTCTTGCACTCAGATATATGTTTCCGTGTGTTTCAGTCTGCTCTTACTGGAGAGTCACTTCCTGTTCTAACATCTATTGAGAATTTCTGCATCTGTTCAATTGCTGTTGGTATGATTATTGAAATCATCGTGATATATGGAATCCATCATAAGAAATACCGAAATGGTGTTGATAGCCTCCTTGTGCTATTGATTGGTGTCATCCCTATTGCAATGCCAACTGTCCTTTCTGTTACAATGGCTATTGGTTCACACAAGTTGGCTCAGCAGGGTGCCATAACAAAGAGAATGACTGCCATTGAAGAGATGGCTGGAATGGATGTGTTATGTAGAGACAAAACAGGTACATTAACTCTTAACAAGCTTTCAGTGGACAAGAATATCATTGAGGTTTTTGCTAAAGGTGTTGACAATGATATGGTTGTACTTATGGCTGCAAGAGCATCAAGGCTAGAGAACCAAGATGCAATTGATTGTGCTATAGTTTCAATGTTAGCAGACCCAAAGGAGGCACGAGCTAGAATAAAAGAAGTTCACTTCCTTCCATTCAATCCAACTGATAAAAGAACTGCACTTACATACCTTGATGCGGCTGGTAAAATGCACAGGGTTAGCAAAGGTGCACCAGAGCAGAGGGTTCATGCAATTATTGAAAAGTTTGCAGAACGTGGACTTCGTTCTCTCGCAGTTGCCCGCCAGGAAGTACCTGAGGGAACTAAAGACAGTCCAGGAGGACCATGGGAGTTTGTTGGCCTTCTTCCTCTTTTCGATCCTCCCCACCATGATAGTGCAGAAACAATTAGAAGAGCTCTTGATCTTGGCGTGAGTGTCAAGATGATCACTAGTGATCAACTTGCAATAGGTAAGGAAACAGGAAGGCATCTAGGGATGGGAACTAACATGTATCCTTCTTCATCATTGCTTGGTGAAAATAAAGATGGATTGGGTGCTGTCGCCATTGATGATCTCATTGAGAATGCTGATGGTTTTGCTGGAGTTTTTCCTGAGCACAAGTATGAGATTGTGAAGAGGTTACAAGCTAGAAAGCACATTTGTGGGATGACTGGTGATGGAATAGCAGACATAGGTATTGCTGTAGCAGATGCTACAGATGCTGCCAGAAGTGCTTCCGACATAGTCCTAACAGAACCTGGGTTGAGTGTGATTATAAGTGCAGTTTTAACTAGCCGTGCGATTTTCCAGAGAATGAAAAATTACACGATATATGCTATATCTATCACTATTCGTATTGTGCTTGGTTTCATGTTACTGAACAGCTTTTGGAAATTTGACTTTCCTCCCTTTATGGTCCTTGTCATTGCCATTCTCAATGATGGTACCATCATGACAATATCTAAAGATAGGGTTAAGCCTTCTCCACTTCCTGATAGTTGGAAGCTTAGTGAAAACTTTACAACTGGGATTGTTCTTGGCAGCTATCTAGCTCTAATGACTGTGATCTTCTTCTGTTTAGTTGTTGAAACGAACTTCTTTCCTGTAAGAACATTTTCATGTGAAACCCTTTCAGATGCTGATAACAGTGATCCAACCAAAAAAATGTTGGGATCTGCTGTCTATCTTCAAGTCAGCACAATTAGTCAAGTCTTAATTTTCGTGAAATGCTCAAGGGGTTGGTCCTACACAGAAAGACCTGGTCTTTTGCTTGTCAATGCCTTCATCATTGCTCAAGCGATTGCAACTGTTGTATCTGCCACTCTCACTTGGAAACTTGCTGGGATCAAAAGTATTGGTTGGGGCTGGACAGGAGTCATTTGGTTATACAATACTATAGCTTATCTATTTCTAGATCCTTTGAAATTTGCTGTTCGTTATGCACTAAGTGGAAGGGCTTGGAATACGGTGATAAACCAAAGGACTGCATTCATCAACAAAAATGACTTTGGTAAAGAAACTCGTGAGGCTGCTTGGGCTACTGAGCAGAGAACCTTACATCGCCTCCACTCTGCTGAGTCAAAAGGGTTAACAGACAAACACACCTTCAGAGAAATTAACACATTGGCCGAAGAGGCTAGGAGGTGTGCAGAGATAGCAAGGCTGAGAGAGCTTCACACTCTGAAAGGTAGACATTTGCCAAGCTAA 2160 0.4157 MTCDILTNTMLHHHIIPYMTLLHSDICFRVFQSALTGESLPVLTSIENFCICSIAVGMIIEIIVIYGIHHKKYRNGVDSLLVLLIGVIPIAMPTVLSVTMAIGSHKLAQQGAITKRMTAIEEMAGMDVLCRDKTGTLTLNKLSVDKNIIEVFAKGVDNDMVVLMAARASRLENQDAIDCAIVSMLADPKEARARIKEVHFLPFNPTDKRTALTYLDAAGKMHRVSKGAPEQRVHAIIEKFAERGLRSLAVARQEVPEGTKDSPGGPWEFVGLLPLFDPPHHDSAETIRRALDLGVSVKMITSDQLAIGKETGRHLGMGTNMYPSSSLLGENKDGLGAVAIDDLIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAISITIRIVLGFMLLNSFWKFDFPPFMVLVIAILNDGTIMTISKDRVKPSPLPDSWKLSENFTTGIVLGSYLALMTVIFFCLVVETNFFPVRTFSCETLSDADNSDPTKKMLGSAVYLQVSTISQVLIFVKCSRGWSYTERPGLLLVNAFIIAQAIATVVSATLTWKLAGIKSIGWGWTGVIWLYNTIAYLFLDPLKFAVRYALSGRAWNTVINQRTAFINKNDFGKETREAAWATEQRTLHRLHSAESKGLTDKHTFREINTLAEEARRCAEIARLRELHTLKGRHLPS 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00369 719 Gene3D - 42 600 - -
Pumo8g00369 719 NCBIfam plasma-membrane proton-efflux P-type ATPase 42 591 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pumo8g00369 719 Pfam haloacid dehalogenase-like hydrolase 126 383 - -
Pumo8g00369 719 Gene3D - 685 716 - -
Pumo8g00369 719 Gene3D - 142 276 IPR023299 GO:0000166
Pumo8g00369 719 ProSitePatterns E1-E2 ATPases phosphorylation site. 132 138 IPR018303 -
Pumo8g00369 719 FunFam Plasma membrane ATPase 269 415 - -
Pumo8g00369 719 PRINTS H+-transporting ATPase (proton pump) signature 546 567 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo8g00369 719 PRINTS H+-transporting ATPase (proton pump) signature 398 423 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo8g00369 719 PRINTS H+-transporting ATPase (proton pump) signature 233 251 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo8g00369 719 SUPERFAMILY Calcium ATPase, transmembrane domain M 45 633 IPR023298 -
Pumo8g00369 719 Gene3D - 127 404 IPR023214 -
Pumo8g00369 719 FunFam Plasma membrane ATPase 142 276 - -
Pumo8g00369 719 PANTHER CALCIUM-TRANSPORTING ATPASE 42 669 - -
Pumo8g00369 719 PRINTS P-type cation-transporting ATPase superfamily signature 293 303 - -
Pumo8g00369 719 PRINTS P-type cation-transporting ATPase superfamily signature 271 282 - -
Pumo8g00369 719 PRINTS P-type cation-transporting ATPase superfamily signature 31 45 - -
Pumo8g00369 719 PRINTS P-type cation-transporting ATPase superfamily signature 390 402 - -
Pumo8g00369 719 SUPERFAMILY HAD-like 126 414 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00369 Pumo-Chr8 11688584 11693517 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00369 37 719 Primary Pumps ATPases AT5G62670 74.610 0.0 1058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00369 K01535 - gmx:100806187 1176.39