Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00358 ATGTCGGAAGTCCTTTCTGGTTTCTTTAAAACGATTGCCGAGAAATTTCTGGATCTGACTATTGGTGAAGCTCGTTACCTGTGTTGTTTCAAGACCATAGTTGAAGAGTTTGAAAAGGAAAAGGGCAAGCTGAGAGGCAAAAGGAAGAGTGTACAAGAGAATGTGGATGCAGCAAAGAATAGAGCAGAGGAGATAGTGAATGATGTTACAGTTTGGATCCAGAATGCTGACAATCTCATCGATGAAGACACTGAGACGAAAAGGACTTGTTTTTCTAGATGGTGTCCCAATTGCATCTGGCAATATCACCGTGGAAAAGAGTTGGTAGAAAAGATGTCGGAGATTTCTGAACTCAAAGGACTTAACTTTGAAAGTGTTGGACGTGCTGCTAAGCTTCCGGGTGTGGAGTACCACTCTTCACAAGATTTTATTGAATTTGAGAGCAGAAGCTCCCAATGCAAACAACTTTTGGAAGCACTAAAAGATGAGCAAAACTATATGGTTGGATTGCATGGTATGGGGGGCACTGGTAAGACAACACTGGTGCAAAAAGTGGGTAAGGAAGTCAAAAGATCAAATCTTTTTGATGAAGTCATCTTCACTACTGTGTCCCATGCCCCTGATATTAGAAAGATTCAAGACAACATTGCAACCCCTTTAGGTCTGAAATTAGAGGAAGGAGATCAGTTGCAAAGAGCCAAAAAACTGTGGTCCAGATTAACTAATGGACAGAGGATACTTGTAATATTAGATGATGTGTGGGAGGAGCTCAAGTTTGAAGATATTGGGATCCCCTCCAGTGACAATCACAATTCGTGCAGAGTTTTGCTTACTTCACGCAAGTTGAGTGTATGCAATTCAATGAGCTGCCAAAGCACCATCGAGCTGGAACTCTTATCTGAGGAGGATGCAAAGACTTTGTTCGAAAAGCATACTGGCTTAAGGGATGACTCGTCCAAAAGTTTAAAGAAATTGGCACAGCAAATTGCAAATGAATGTAAAAGATCACCTGTTGCGATTACAGCTATAGCAAAAAGTTTAAAACACCAGCCTCCAGAACTTTGGAAGGCAGCTTTAAAAAGCTTGAAAGAATTTAAACAAATCCGCAGTATTGATGAAGATTTAAAGATTTATAAATGTTTCCAGGTAAGCTATGAAAATCTTAAGGATGAAAAGGCCAAAAAACTCTTCTTGTTATGTTCTTTATTCCCTGAAGATTATGAAATTTGTGTGGAAGATTTAATCAGATATGGTAAAGGATTGGGCTTATTTGGAGAGGTTGACTCATATGAAGCAGCAAGGATAGAAATGCTTACAGCGAAAAGGAAACTCCTAGATGCTTGTTTATTATTGAAAGGTCGGGAAGGATGTGTAAAAATGCATGACCTAGTACGTGATGCAGCTCACTGGATAGCAAATTATGAGATTCAGGGGATTATGGGATCCAAAATTCATGCAACAGCAAAACAAAGTACCATAATGTATTTGTATCTCCACAATGTAAAAAGATTTTCCCTACCTAATCAATTGGATTGCACCAAACTTAAGATTCTAATAGTACTTTGCTTAGATAAAGAAGCTTCCGTGGAAACGCCACAAGCATTTTTTGAAGGAACCAAAGATCTAGAAGTTTTGGCTATAGCGAGGGCAGAAAACATTAGGGGCAAACCAAGTCTATCTTTGCCACGATCAATCGAATTCTTAAAAATTCTCCGAACTCTATGCTTGAGAGGTTTTAATTTAGGTGATATTTCTGTTGTGCAAAAACTAGACATACTTGAGACTCTTGAGTTGAGTGATTGTTCAATCAATAGACTGCCAAATGGGATTGTGAAACTTGAAAAATTGAGGTTATTGAGCTTGACACAGTGTGCAATTGAAAGGAATCCTTATGAAGTGATTGGTAGACTTTCTCAATTAGAGGAATTGTATATTATGAGAAGTCCTGACAGATTCAGATGGAAGTTTGACAAAGAAGTTGTTGCTAGCATATTTGACAAAGATAACATAACCCCAGCATTGCAGAGATATCATATACAGATAGGACACGATTCCGGATTATATCACTCAGTGGATGATTCCATATCAAGAGGTTTGTCTATTGAATATTTTGATCCTAACTCAAATGCAACAATTAAGGACCTGGTTCAAAGAGCAGAGATTCTACACTTGAAGAGGATTCAGGGAGATTATACAACTGTAGCCCCGCACTTAGTGGAAGCAATAGGAGACATGAATGACATGATCCATCTCAAGCTTGAGTTTTGTTCTTTGATAGAATGCCTCATTGATACTAGTAACTTTTCATCTACGGTGGGAAGCATCTTCTCCAAGCTGGTTATGATAGAAGTCAGAGGCATGGATCATTTGAAAGAACTGTGCCATGGTCCACCTCCTTCTGACTTTCTTGGTAACCTAGAAGAGTTGAGTATACATTTGTGTCACCAATTGCATGGCAGATTATTTGTGGGAAACTTAAACCTCAGTAGACTTAAGGTGTTTCAAGTGGAATATTGTCGCATGTTGACATCTATGTTCACACCTTCCACTGCTGCAAGCTTAGTGCTGCTGGAAGAACTGATAATAGAGGGATGCAAGGAACTGAAAAACGTAATAGCAAGTGAGAGAGAAGACAACAGACAAGAGCAAATACTTCAGCATGATGATGATAATCAAAATGAATATGGCTCGATGTTTCCCAAATTGAAAACTCTTGACATAATAATGTGTGACCAATTAGAATTAATGATCACAGTATGTCCCCAAATGAATACAGTAGGTGCAACAAGAAGGGAGTACCTTCGACCCCTCAGCACTGCTTATTCCCTTTCGAGTCAGTCACTGATCCTGCGCCATGTCAGAGAAATGAAACTCAAAAACTGTTTAAAAACAAAACTACTGTTCTCTCTATCTGTTGCTCGAACAATGTTGTTGGAAGAATTGAGAATTAAGGAATGCCATTCACTGAAGAACATTGTAACAGATGTCGGAGATGATCATAGTTGCATGACATTGTGGCTCTGTCTTCCCAAGATTGAAATTGCTAAGTGTTTCAGATTGTAG 3063 0.3888 MSEVLSGFFKTIAEKFLDLTIGEARYLCCFKTIVEEFEKEKGKLRGKRKSVQENVDAAKNRAEEIVNDVTVWIQNADNLIDEDTETKRTCFSRWCPNCIWQYHRGKELVEKMSEISELKGLNFESVGRAAKLPGVEYHSSQDFIEFESRSSQCKQLLEALKDEQNYMVGLHGMGGTGKTTLVQKVGKEVKRSNLFDEVIFTTVSHAPDIRKIQDNIATPLGLKLEEGDQLQRAKKLWSRLTNGQRILVILDDVWEELKFEDIGIPSSDNHNSCRVLLTSRKLSVCNSMSCQSTIELELLSEEDAKTLFEKHTGLRDDSSKSLKKLAQQIANECKRSPVAITAIAKSLKHQPPELWKAALKSLKEFKQIRSIDEDLKIYKCFQVSYENLKDEKAKKLFLLCSLFPEDYEICVEDLIRYGKGLGLFGEVDSYEAARIEMLTAKRKLLDACLLLKGREGCVKMHDLVRDAAHWIANYEIQGIMGSKIHATAKQSTIMYLYLHNVKRFSLPNQLDCTKLKILIVLCLDKEASVETPQAFFEGTKDLEVLAIARAENIRGKPSLSLPRSIEFLKILRTLCLRGFNLGDISVVQKLDILETLELSDCSINRLPNGIVKLEKLRLLSLTQCAIERNPYEVIGRLSQLEELYIMRSPDRFRWKFDKEVVASIFDKDNITPALQRYHIQIGHDSGLYHSVDDSISRGLSIEYFDPNSNATIKDLVQRAEILHLKRIQGDYTTVAPHLVEAIGDMNDMIHLKLEFCSLIECLIDTSNFSSTVGSIFSKLVMIEVRGMDHLKELCHGPPPSDFLGNLEELSIHLCHQLHGRLFVGNLNLSRLKVFQVEYCRMLTSMFTPSTAASLVLLEELIIEGCKELKNVIASEREDNRQEQILQHDDDNQNEYGSMFPKLKTLDIIMCDQLELMITVCPQMNTVGATRREYLRPLSTAYSLSSQSLILRHVREMKLKNCLKTKLLFSLSVARTMLLEELRIKECHSLKNIVTDVGDDHSCMTLWLCLPKIEIAKCFRL 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00358 1020 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 400 IPR027417 -
Pumo8g00358 1020 Gene3D - 131 296 IPR027417 -
Pumo8g00358 1020 SMART AAA_5 164 318 IPR003593 GO:0016887
Pumo8g00358 1020 PRINTS Disease resistance protein signature 333 347 - -
Pumo8g00358 1020 PRINTS Disease resistance protein signature 240 254 - -
Pumo8g00358 1020 PRINTS Disease resistance protein signature 588 604 - -
Pumo8g00358 1020 PRINTS Disease resistance protein signature 167 182 - -
Pumo8g00358 1020 Gene3D - 299 384 IPR042197 -
Pumo8g00358 1020 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 29 925 - -
Pumo8g00358 1020 SUPERFAMILY L domain-like 455 924 - -
Pumo8g00358 1020 FunFam Probable disease resistance protein At1g61300 132 293 - -
Pumo8g00358 1020 Gene3D Ribonuclease Inhibitor 466 652 IPR032675 -
Pumo8g00358 1020 Pfam NB-ARC domain 155 387 IPR002182 GO:0043531
Pumo8g00358 1020 Coils Coil 34 68 - -
Pumo8g00358 1020 Gene3D Ribonuclease Inhibitor 721 1018 IPR032675 -
Pumo8g00358 1020 Gene3D - 385 465 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00358 Pumo-Chr8 11507544 11531037 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00358 168 477 WRKY Transcription Factor Family AT5G45050 27.044 4.86e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00358 - - mtr:25482506 1642.09