Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00349 ATGGCAAGCACTCCCAGCATTATTCCTTCACACATGAAAGCTTGGGTTTATTCTGATTATGGGAACACAGAAGAGATTCTGAAATTTGATCCTAAGGTACCTATACCAGACATCAAGGAAGACCAGGAGCTTATCAAGGTTGTGGCTGCAGCCCTTAATCCTGTAGATTATAAGAGGGCTCTTGGCTATTTCAAGAACACTGACTCTCCCTTACCTACTATTCCGGGGTATGATGTTGCTGGTGTGGTGGTCAGAGTGGGAAGTCAAGTGAGAAAATTCAAGGTTGGGGATGAAGTTTATGGTGATATCAATGAGCATGCTGCGAATAGTCTAAAGACCATTGGGTCTTTGGCTGAGTATACTGCTGCTGAAGAGAAACTATTGGCCCACAAACCCTCCAATTTGAGCTTTATTGAAGCTGCTAGCCTTCCTTTAGCCATAATCACTGCTTATCAAGGACTTGAAAGAGTTGAGTTTTCTGCTGGCAAATCTATTCTTGTTCTGGGAGGTGCTGGAGGAGTTGGAACCCTTATTATTCAGCTTGCCAAACATGTTTTTGGGGCATCAAGGATATTGGCTACTTCTAGCACTGCAAAGTTGGAATTGTTGAGAAACTTGGGAGCAGACTTACCTATTGATTATACAAAGGAGAATTTTGAAGAACTGGCAGAAAAGTTTGATGTGGTGTACGATACAGTAGGGCAGAGTGAGAGGGCATTGAAGGCTGTTAAAGAAAGGGGTAAAGTTGTGACAATAGTATTGGTGCCACCTCAAACTCCTCCAGCTATCCCCTTCTTACTCATTTCAGATGGTGCTGTGTTGGAGAAACTGCAACCTCACTTAGAGAGTGGGAAAGTGAAGCCTGTGTTGGATCCTATAAGTCCCTTTCCATTTTCTCAAACTGTGGAGGCATTTGCATACTTGAAGACTAATAGGGCCATTGGGAAAGTAGTCATACATCCCATCCCATAA 972 0.4321 MASTPSIIPSHMKAWVYSDYGNTEEILKFDPKVPIPDIKEDQELIKVVAAALNPVDYKRALGYFKNTDSPLPTIPGYDVAGVVVRVGSQVRKFKVGDEVYGDINEHAANSLKTIGSLAEYTAAEEKLLAHKPSNLSFIEAASLPLAIITAYQGLERVEFSAGKSILVLGGAGGVGTLIIQLAKHVFGASRILATSSTAKLELLRNLGADLPIDYTKENFEELAEKFDVVYDTVGQSERALKAVKERGKVVTIVLVPPQTPPAIPFLLISDGAVLEKLQPHLESGKVKPVLDPISPFPFSQTVEAFAYLKTNRAIGKVVIHPIP 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00349 323 Pfam Alcohol dehydrogenase GroES-like domain 42 105 IPR013154 -
Pumo8g00349 323 Gene3D - 154 270 - -
Pumo8g00349 323 CDD MDR_like_2 12 319 - -
Pumo8g00349 323 Gene3D - 19 319 - -
Pumo8g00349 323 SMART PKS_ER_names_mod 22 319 IPR020843 GO:0016491
Pumo8g00349 323 Pfam Zinc-binding dehydrogenase 206 319 - -
Pumo8g00349 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 135 273 IPR036291 -
Pumo8g00349 323 SUPERFAMILY GroES-like 8 167 IPR011032 -
Pumo8g00349 323 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 162 183 IPR002364 GO:0008270|GO:0016491
Pumo8g00349 323 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 6 323 IPR044626 GO:0016628
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00349 Pumo-Chr8 11266048 11268908 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00349 69 266 Monolignol Biosynthesis Gene Families AT4G37990 24.123 1.45e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00349 K18980 - gmx:100791274 531.946