Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00340 ATGTCACATAGGGATGATGCTAAGCTACTTGAGGAAATCATCAAACTTGTTATGATGAGGATGGGTAAACCCTTGGTTAACTCAAAAGGAATTGTTGGAATTGAAAAAAAAATTGCAGATGTAGAATCATTGATACGTAAAGAGCCAAAAGATACCCGTCTTATTGGAATTTGGGGTATGGGCGGTATCGGCAAGACAACCCTTGCAAAAGAAGTATTTAACAACTTACGGTCTGAATATCAAGGTTCATGTTTTTTAGCCAACGAAAGAGAACAATCAGGAAAAAATGGAATAATTTCTTTGAAGAAAGAAATTTTTACTGAACTGTTAGGACATGCTCCAAATTCATTTTTCGATGATAGAATTCGTCGTATGAAGGTTCTTATTGTTCTTGATGATATGAATGATTTTGGTCACCTATCTGAATTATTGGGACCTCTTGATAATTTTGGATCAGGAAGTACAATAATTGTAACAACTAGAGACAAGCAAGTGCTTAATGCTAACAAAGCTGATGCGATATACCAGCTTGGAGAATTCAGTTTTGATAATGCACTTGAACTTTTCAAATTGAATGCCTTTAACCAGAGTGATCATCCAATGGAGTACGATGATCTATTAGAAAGGGTGGTCAATTATGCCCAAGGCATTCCATTAGTTGTTAAAGTTTTGGCTTGTTGTCTTTACGGAAAAAAGAAGGAAGTATGGGAAAGTGAGCTTAACAAGCTTGGAAAAATGCCTCTTCAAAAAGTTTATGATATAATGAAACTGAGTTATGATGATCTAGATCGTAAAGAAAAACAAATATTTCTAGATCTTGCATGTTTCTTTCTTATATTAGATACAAAGCTAACGGTGGGTTTTCTAATATCTGTATTAAGAAATGGTGAAAGTGATAAGTCAGTGGCTGCTGGGTTAGATAGGCTAATAGATAAAGCTCTTATAACTTTCTCGGAAGATAATTTTGTATCTATGCATGATAGTTTACTAGAAATGGCTTGGGAAATTGTTTGTCAAGAATCTATGGAAGACCCTGGAAGCCGTAGTTGGTTATGGATTCCTGATGACGTTTGTGAAGCATTGAAAAATGACAAGGGTACTCTGGCCATTAGAAGCATACTGCTTCACTTGCCTCGAACCAAGAAGCAAAAATTAAGCCTTCACATACTTGCTAAGATGAGCAGACTACGATTTCTGGAAATTTCTGGGCAAGTCGAATATGATAGGTTGAATGACAACCAGCACAAGTGGCTGAGTTGGCTGAAGCTGAGTTGGCCGAAGCTGCAAAAAGCTTGGAGTGATGATATTGTTGCTAAAGGGCTTAAATTTTGGACAAGTGAACTAATATTTCTTAGTTGGGAGTATTACCCTCTAACATCCTTGCCAGAGAATTTTTCTAGCGAAAAGCTTGTAATATTGAAATTACGAAGTGGCAAAATGAAAAAACTTTGGGATGGAGTGAAGAATCTGGTGAATTTAAAAGAAGTTGACCTCAGTTACTCTGAGAAGTTAAAGGAGCTACCAGATTTATCAAAAGCCACAAATCTTGAAGTACTGCTTCTCGTAGTACCCAGTCGGCATTTACACATTTGCAGTGGACATCTCTATAAGATGATGAGGGTGAAGGTTGAAAGGATTCGCATGTTTCCAGAACAAGTTCGTTATGCATTAGCGAAGGAAGTTTTGAAAGGATTTGGGGTAATCAAAGGGCATGATGCGTATGAGCTCCAACACTTGAAAGATTGTGCACCATCACCTGGTTGTCAAGAGTCCAAAGCCCTTCTAGAAGTTCAGTCAGTTTGA 1803 0.3727 MSHRDDAKLLEEIIKLVMMRMGKPLVNSKGIVGIEKKIADVESLIRKEPKDTRLIGIWGMGGIGKTTLAKEVFNNLRSEYQGSCFLANEREQSGKNGIISLKKEIFTELLGHAPNSFFDDRIRRMKVLIVLDDMNDFGHLSELLGPLDNFGSGSTIIVTTRDKQVLNANKADAIYQLGEFSFDNALELFKLNAFNQSDHPMEYDDLLERVVNYAQGIPLVVKVLACCLYGKKKEVWESELNKLGKMPLQKVYDIMKLSYDDLDRKEKQIFLDLACFFLILDTKLTVGFLISVLRNGESDKSVAAGLDRLIDKALITFSEDNFVSMHDSLLEMAWEIVCQESMEDPGSRSWLWIPDDVCEALKNDKGTLAIRSILLHLPRTKKQKLSLHILAKMSRLRFLEISGQVEYDRLNDNQHKWLSWLKLSWPKLQKAWSDDIVAKGLKFWTSELIFLSWEYYPLTSLPENFSSEKLVILKLRSGKMKKLWDGVKNLVNLKEVDLSYSEKLKELPDLSKATNLEVLLLVVPSRHLHICSGHLYKMMRVKVERIRMFPEQVRYALAKEVLKGFGVIKGHDAYELQHLKDCAPSPGCQESKALLEVQSV 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00340 600 SUPERFAMILY L domain-like 325 521 - -
Pumo8g00340 600 Gene3D - 10 174 IPR027417 -
Pumo8g00340 600 SUPERFAMILY "Winged helix" DNA-binding domain 250 362 IPR036390 -
Pumo8g00340 600 Gene3D Ribonuclease Inhibitor 372 551 IPR032675 -
Pumo8g00340 600 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 534 IPR044974 GO:0006952
Pumo8g00340 600 Pfam NB-ARC domain 42 260 IPR002182 GO:0043531
Pumo8g00340 600 Gene3D - 180 263 IPR042197 -
Pumo8g00340 600 PRINTS Disease resistance protein signature 214 228 - -
Pumo8g00340 600 PRINTS Disease resistance protein signature 488 504 - -
Pumo8g00340 600 PRINTS Disease resistance protein signature 54 69 - -
Pumo8g00340 600 PRINTS Disease resistance protein signature 121 135 - -
Pumo8g00340 600 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 273 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00340 Pumo-Chr8 11008975 11013551 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00340 1 517 WRKY Transcription Factor Family AT4G12020 31.784 9.58e-66 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00340 - - gsj:114404194 665.611