Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00331 ATGTCTGCCTCCAACGCTCTCAGATCATCAAAACTGGTGTCATGGAAACCCACTGGGAGGCTTCAGCAAACCCTAGCGGGTTGCGTGGAGCGGCGCGGCAAGGCATTGCATTCGGGAAAAGTTTCGACGGTGAGATTGTGTCCCGAACTCGCTTCCCGAGGCAGGTACTTCGATTTTCGCTCCAATTCCGTTCCCGCCTCTGTTGAGTTCGCTCAGGTCTCGCCCCTCTGCACCACTCTGTGCAAAGACGGGTTCCGAATTCGAACCGTGGAGCACTTGCTCTCGGCTTTGGAGGCTGCGGGTGTTGATAATTGCAGGATCGAGATTGAGGATTTTGATGCTCAAGGACGCGAAGCCGAGATTCCTATATTTGATGGGTCAGCAAGGGAATGGGTGGCAGCAGTGGAAGAAGTTGGTTTAACAGTGGCCACTGATCTTGATGGCAAAAGTGTTGAGAAAATGGCACCACATGTGAATGAACCAGTGTATGCTTGGAGAAATGATTCTTTTGTTGCTGCATTTCCTTCAGAAATGGTTCGAATAACTTATGGCATCAACTTTCCGCAGGCACCTGTTATTGGCTGCCAGTGGTTTTCTACACCCCCCTTGGATAATCTGGTTTATTCCAAGCAGATAGCTTTGTCAAGAACCTTCTGCATTTATGAGGAGGTTGAGCAAATGCGCAATGCTGGACTTATCAAAGCAGGTTCTCTAGAAAATGCCATTGTGTGCAGTGCCAGTAAAGGTTGGTTGAATCCACCTCTGCATTTCCGTGATGAACCATGTCGTCACAAGATCTTAGACCTTATTGGTGATCTGTCACTGTTTGCTCAGTTTGGGAATCAAGGACTCCCAGTGGCACATATCGTAGCGTACAAGGCACGTGCCTTTGGTTCTGTCTTTCCTATATTAAATATTCTCATTTTTCAATTTGACTTTCATTGTGTCACAATTGATGATGTTGTATTTTGTGCAGCCTAA 981 0.473 MSASNALRSSKLVSWKPTGRLQQTLAGCVERRGKALHSGKVSTVRLCPELASRGRYFDFRSNSVPASVEFAQVSPLCTTLCKDGFRIRTVEHLLSALEAAGVDNCRIEIEDFDAQGREAEIPIFDGSAREWVAAVEEVGLTVATDLDGKSVEKMAPHVNEPVYAWRNDSFVAAFPSEMVRITYGINFPQAPVIGCQWFSTPPLDNLVYSKQIALSRTFCIYEEVEQMRNAGLIKAGSLENAIVCSASKGWLNPPLHFRDEPCRHKILDLIGDLSLFAQFGNQGLPVAHIVAYKARAFGSVFPILNILIFQFDFHCVTIDDVVFCAA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00331 326 SUPERFAMILY Ribosomal protein S5 domain 2-like 21 141 IPR020568 -
Pumo8g00331 326 Gene3D lpxc deacetylase, domain 2 157 296 IPR011334 GO:0008759|GO:0009245
Pumo8g00331 326 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 22 294 IPR004463 GO:0008759|GO:0009245
Pumo8g00331 326 Gene3D lpxc deacetylase, domain 1 20 146 IPR015870 GO:0008759|GO:0009245
Pumo8g00331 326 SUPERFAMILY Ribosomal protein S5 domain 2-like 160 294 IPR020568 -
Pumo8g00331 326 NCBIfam UDP-3-O-acyl-N-acetylglucosamine deacetylase 22 294 IPR004463 GO:0008759|GO:0009245
Pumo8g00331 326 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 2 295 IPR004463 GO:0008759|GO:0009245
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00331 9 294 Carbohydrate Esterase AT1G25054 68.531 1.53e-144 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00331 K02535 - gmx:100814465 552.747