Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00323 ATGGTGTCGAAATTTTTCGTGAACCCCACCTTGGACGTGGAGAAGAAGCGCAAGTTGGTGGACGAGATTGTCGAGTCCTCAGGCTTCCAACCCCACATGAGAAACTTCCTCTACATCCTCATCAACGTGCAGAGGATCGATCTCATCAATGAGATCTCCAAGGAGTTCGAGCTCGTCTATAACACCTTGACCGACACCGAGCTTGCGGTCGTGACCTCTGTCGTGAAGTTAGAGTCGCAGCACTTAGCCCAAATCGCGAAGCAGGTTCAGAAACTCACTGGGGCGAAAAACGTGAGGATTAAGACCCTCCTTGACCCAAGTTTGGTGGCGGGTTTCACTATGAGATTTGAGAATTCCAAGTTGATTGACATGAGCGTCAGGAAGCAGCCTGAGGATATTGCTGCTCAGCTTGAGTTGGGTGATATCACACTCGCCGTATGA 441 0.5011 MVSKFFVNPTLDVEKKRKLVDEIVESSGFQPHMRNFLYILINVQRIDLINEISKEFELVYNTLTDTELAVVTSVVKLESQHLAQIAKQVQKLTGAKNVRIKTLLDPSLVAGFTMRFENSKLIDMSVRKQPEDIAAQLELGDITLAV 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00323 146 Pfam ATP synthase delta (OSCP) subunit 2 137 IPR000711 GO:0015986|GO:0046933
Pumo8g00323 146 PRINTS ATP synthase delta subunit signature 45 59 IPR000711 GO:0015986|GO:0046933
Pumo8g00323 146 PRINTS ATP synthase delta subunit signature 34 45 IPR000711 GO:0015986|GO:0046933
Pumo8g00323 146 PRINTS ATP synthase delta subunit signature 112 130 IPR000711 GO:0015986|GO:0046933
Pumo8g00323 146 PRINTS ATP synthase delta subunit signature 96 111 IPR000711 GO:0015986|GO:0046933
Pumo8g00323 146 PANTHER ATP SYNTHASE DELTA CHAIN 2 138 IPR000711 GO:0015986|GO:0046933
Pumo8g00323 146 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 3 64 IPR026015 -
Pumo8g00323 146 Hamap ATP synthase subunit delta [atpD]. 7 139 IPR000711 GO:0015986|GO:0046933
Pumo8g00323 146 NCBIfam ATP synthase F1 subunit delta 3 137 IPR000711 GO:0015986|GO:0046933
Pumo8g00323 146 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 98 117 IPR020781 GO:0015986|GO:0016020|GO:0046933
Pumo8g00323 146 Gene3D - 1 58 IPR026015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00323 Pumo-Chr8 9797532 9798148 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00323 5 145 Primary Pumps ATPases AT4G09650 67.832 9.03e-65 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00323 K02113 - gmx:100815063 244.202