Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00316 ATGCATCTCCGGCACCTCCTCTCTTTCTCGCGTAGGTCACTACACACCTGCGACGGCGTTGGCGACGTCACAGAGCGACGCATACTAACCATGGACCTGACTACGGAGGAGCAGAAGCGTGACGGGGCAGTGCTGGTGGAGATATTCTCGTCGCAGGGGTGCGTGATGTCGCCGGCAGCGAAGCTGGTGTTGTCGCGGCTGAGATATTTTCGTAAGAATAAGCAGAAGAATGTGGGTGGTGAAGGAAGAAACAGAAGGGTGCTTAATGATATTGGGAATCTTGTTGCTGCAACAAAGGTGGAAGCAGCTCAGAGGGTTAAAGAAGAACCTGAAGTGATTCTCATTAGCTCTGATGATGAATGGCAAGAAGAGAAGCAGAAGCAAGCTGTTAAAGGAAAAAAAGGCAAGGGAAAAATGCAAAGGCATTCAGGGTCTAACAACAAAACTTGTCAACCTCAGGCTGCTTGTGGACTCCCAAGGGATTTGATATTCAACATTGATGAAGCTTACATGGACAATGAATTGGCAGCAGCCGAGTATATCGATGATATTTATAAATTTTACAAAGAGAACGAAGAAGATGGCTGTGTGCATGATTACATGGGTTCACAGCCTCATATTAATGCCGAGATGAGATCAATCCTTGTGGACTGGTTGATAGAAGTGCATAGAAAGCTTGAGCTCATGCCAGAAACGTTGTATTTGACTCTGAACATTGTTGATCGGTTCCTGTCTGTGAAGGCTGTGTCAAGAAGGGAACTTCAGCTGGTTGGCATCAGCTCAATGCTGATAGCCTCAAAATATGAAGAGATATGGGCACCACAGGTTAATGATTTTGTGTGCTTATCAGACAATGCTTATGTTAGTGAACAAGTGTTGATGATGGAGAAAACAATTCTTAGGAAGCTTGAATGGTGCTTAACAGTTCCAACACCCTATGTCTTTTTGGTTTGGTATATCAAAGGCTCCACTCCACCTGTTAAAGAGAGTGGAATGCACTGTCGAATGTGCCTAATTTTCGTCGATGTAGATGGAACACATGGCATTTTTCCTTGCTGA 1059 0.4495 MHLRHLLSFSRRSLHTCDGVGDVTERRILTMDLTTEEQKRDGAVLVEIFSSQGCVMSPAAKLVLSRLRYFRKNKQKNVGGEGRNRRVLNDIGNLVAATKVEAAQRVKEEPEVILISSDDEWQEEKQKQAVKGKKGKGKMQRHSGSNNKTCQPQAACGLPRDLIFNIDEAYMDNELAAAEYIDDIYKFYKENEEDGCVHDYMGSQPHINAEMRSILVDWLIEVHRKLELMPETLYLTLNIVDRFLSVKAVSRRELQLVGISSMLIASKYEEIWAPQVNDFVCLSDNAYVSEQVLMMEKTILRKLEWCLTVPTPYVFLVWYIKGSTPPVKESGMHCRMCLIFVDVDGTHGIFPC 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00316 352 ProSitePatterns Cyclins signature. 212 243 IPR006671 -
Pumo8g00316 352 Gene3D - 309 322 - -
Pumo8g00316 352 FunFam G2/mitotic-specific cyclin 196 308 - -
Pumo8g00316 352 SUPERFAMILY Cyclin-like 172 307 IPR036915 -
Pumo8g00316 352 Gene3D - 198 308 - -
Pumo8g00316 352 PANTHER CYCLINS 134 320 IPR039361 -
Pumo8g00316 352 MobiDBLite consensus disorder prediction 125 151 - -
Pumo8g00316 352 SMART cyclin_7 217 301 IPR013763 -
Pumo8g00316 352 Pfam Cyclin, N-terminal domain 183 307 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00316 Pumo-Chr8 9534382 9542020 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00316 74 325 Core Cell Cycle Gene Families AT2G26760 53.585 2.09e-90 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00316 K21777 - gmx:100801274 354.369