Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00309 ATGAAATCACTGCAGGCGGTGGAGGAAATTGTGCATCCGACGTTTAAGGAAGCCCGAAATGATGACAATAAGAAACCTCATGAGGTATTCACTGAAACGCACCAGGAGCTGGTGAAAGCTGGAGAGGCATGGGCAAAACAAACAGCTAATTCTTTTACAATTGTGGGTACCCTGATCACTACTATCATGTTCGCCGCCGCCTTCACTGTCCCAGGGGGAAACAAGCAAGACACCGGAGATAAAAAATGGAAGATGGAACACATGGCATTTTTCCTTGCTGAACTTTCTTTGATGCACTATCCTACTGCAATCTTGTACCGGCCTTCTCTGATTGCTGCTTCTGCTAGAAGCACTTTGAAGCACTACACAGGCTACACTGAGGAGCAACTGAGCGATTGTGCCAAAATCATGGTCAACCTTCATGCTGCTGCTCCAGGAAGTATGCTTAGGGCAGTTTACAAGAAATTCTGTAGCTCAGATCTTTGTGCTGTTGCTCTTCTTTCTCCAGCGAAGAACTTGTTAGCAATGTCTTGA 534 0.4588 MKSLQAVEEIVHPTFKEARNDDNKKPHEVFTETHQELVKAGEAWAKQTANSFTIVGTLITTIMFAAAFTVPGGNKQDTGDKKWKMEHMAFFLAELSLMHYPTAILYRPSLIAASARSTLKHYTGYTEEQLSDCAKIMVNLHAAAPGSMLRAVYKKFCSSDLCAVALLSPAKNLLAMS 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00309 177 Pfam Cyclin, C-terminal domain 79 169 IPR004367 -
Pumo8g00309 177 PANTHER CASKIN 7 92 - -
Pumo8g00309 177 SMART Cyclin_C_2 59 170 IPR004367 -
Pumo8g00309 177 Pfam Domain of unknown function 43 83 IPR026961 -
Pumo8g00309 177 SUPERFAMILY Cyclin-like 81 172 IPR036915 -
Pumo8g00309 177 Gene3D - 51 115 - -
Pumo8g00309 177 Gene3D - 116 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00309 Pumo-Chr8 9343115 9350859 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00309 84 174 Core Cell Cycle Gene Families AT4G37490 42.727 6.77e-19 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00309 K21777 - gmx:100801274 146.362