Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00292 ATGATACGCTGGGTTGCCAATAGAGGACCCACACCCACCGTCGCCAATGATACAATAAACTCCCTCACTCCTTCTCCTCGATCCACCACTTTCGAACTGCACTTACTTTCCTTTTCCTGTAGGCTTGTGTTTGTATTGTGCGTTTCGATTCTTCGGCTATATGCTCACTCTCCGACACTGAAATATTCTCGTGAGACGACGTCGTTGCTTTCAGCGGCAGTCATGGCTCCGGGTGCGGCGGAGTTTCCGGTGGGTCTCCAGGTTCTGGTGATCGCCGACGACGCCACCACCTTCAAGATTATCGAGCAAATGTCCATTCGCTGCCGTTACTGCGTTACCACATGCACTGAGGCTACTGTGGCTTTGAATCTTCTGCGGGAAAGGAAAGGTTGTTTCAATGTGGCACTGATTGATGCTGATATGCCAGACATGGATGGCTATGAACTCCTAGAACATGTTGTGCTGGAAATGGACCTTCCTGTAATTATGATGTCTGGTGATAGTACAAGAAGTGCTGTCATGAAGGGAATTACACATGGGGCTTGTGATTATTTGATTAAGCCGGTACGTGAGGAAGAACTGAGGAATATATGGCAGCATGTTGTTAGGAAATTCTGGAATGAAAATAAAGAACATGATAATTGTGGCAGCACGGAAGACAGTGATCATAGTAAACAGGGGAATGATGATACTGAATATACTTCTTGTGTTGCTGATGCAGCAGAAGCAGTTAAAGCACCAAAAAAGAAGAGCAGTTTAAAAGAAGAAGATATTGAATTGGAGAGCGAGATGATCCAGCTACATCTAAGAAGCCCCATGTAG 822 0.4574 MIRWVANRGPTPTVANDTINSLTPSPRSTTFELHLLSFSCRLVFVLCVSILRLYAHSPTLKYSRETTSLLSAAVMAPGAAEFPVGLQVLVIADDATTFKIIEQMSIRCRYCVTTCTEATVALNLLRERKGCFNVALIDADMPDMDGYELLEHVVLEMDLPVIMMSGDSTRSAVMKGITHGACDYLIKPVREEELRNIWQHVVRKFWNENKEHDNCGSTEDSDHSKQGNDDTEYTSCVADAAEAVKAPKKKSSLKEEDIELESEMIQLHLRSPM 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00292 273 PANTHER TWO-COMPONENT RESPONSE REGULATOR 87 245 IPR045279 GO:0009736
Pumo8g00292 273 MobiDBLite consensus disorder prediction 211 234 - -
Pumo8g00292 273 MobiDBLite consensus disorder prediction 211 229 - -
Pumo8g00292 273 SMART REC_2 86 198 IPR001789 GO:0000160
Pumo8g00292 273 Gene3D - 86 224 - -
Pumo8g00292 273 ProSiteProfiles Response regulatory domain profile. 87 202 IPR001789 GO:0000160
Pumo8g00292 273 CDD REC_typeB_ARR-like 88 202 - -
Pumo8g00292 273 Pfam Response regulator receiver domain 88 197 IPR001789 GO:0000160
Pumo8g00292 273 SUPERFAMILY CheY-like 86 209 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00292 Pumo-Chr8 8572618 8574683 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00292 81 230 Response Regulator Gene Family AT2G25180 55.629 3.40e-51 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo8g00292 Response_reg 6.5e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00292 - K14491 gmx:100817125 320.472