Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00273 ATGACAACCAGATCGAGAAAATCGAAGCGCAAGCTGGAACCGGAGCCACCTCCGTTCACCATTACCAAGAAGCTCCGGCAGAGGCTCCCTCGCCGGCAACGGCAAAACATCTCGCCGGTGCTCCTCATCAGCATCTCCGGCCAGAATCCTCGTTTCTCCGTCGATTCCAGCTCCGGCTCCGACTTCGCCGCCGGCGAAGCCTCGTGCAACTCAAGCAGAGCTTCCGTCGCCGGCAAGGGAAACGCGAACTCGAGAAACGAATTCTCAATCGATTCCACTAGAAATCGGAGATTCGAGAAGCGAAACGAGAACGAAGTGGAAGTGTCGGAGTCTTCGTGCGTGGACTCTGCTTCGTTCGCTGGCGAACGAAGTGAACGAAGCAGAAGCTTGATTCTGAAGTTCAAAAGAGAAAATAAGAATCCGAAGGAAAACGACGACGTTTCGTGCGCGAAATCAGAGATTACTACTATTCTGAAGTTCAAAAGCGGAAGCGAGAGCAAGAATCTAAAAGAAAACGACGACGTTTCGTGCGCGAAGTCAGAGATCACTAGCGAGGAACAGTTCAATTCAAAGTCCTCCGGTAACGGTAACGGAAACACCAAAATCTCTTCGGAGTCCAACGCGAACGACGTCGTGTCGTTTAGTTCCGGTGTTTGCGCGTCGTTTCATGAGGAAAATAATAGAAACAAGGAAAACACTAAAAACAGAGCATCTGAATGTGAATACTCTCAAGGTTCTAGAAGCCTCCACGCGGAAGAGAATTGCGCGGATTTAATTGCGCAATCGATGACGAAGCAGGAATCGGATATATACGACGTCGTTGCGGATCTCGCTTGCTCTGAGGATCTGCGTTTCTCGTACTGTGACGACGACGAATCGGAGTACTGTTCTAGCCAGGGAACTGTGTTCTCTGAATTTCATTCCGAGATTTTCGGCGAATGCTCGCAGCCGGAGCTTTCGGATTTTTCTCCGTCGCTGTTTGTGGATTCCGGAAGCCAGTTTTCGGAGGGATCCGTCGGAGAAACTCCTTCGCCGACGTATTTGTTGTTCCTTCAGTACCGTAAGGAGTTCACCGCGCTAGTTTCTGCTTCTCCAGTGATGAACGCTTCAAGCGTTGTAGAAGATGTTGTCAATTTTGTGAGATTCGAAGATTCCGATGACGAAGACAGCTACCAGATGCTGAGGAAGAGGGAGAGGAGGCAAGGTTTTGTGTCGAATTATAGTGAGAGATATTTCTCTACCACTGAATTCGGAGACACCGTGATTGAGCAACGTGCGCAAATGGTTCACTGGATTGTTGAGCAATCTTATCGAAGACAGCTTCGGCAAGAGACAGTGTTTCTTGGAGTCAACCTACTTGACCGTTTCCTAAGCAAAGGATACTTCAAAGCCAAAAGAAACCTTCAAATTGTTGGAATAGCTTGCCTCACGTTAGCGACCAGGATCGAAGAAAACCAGCAATATAACAGAGTGGGGCAAAAAAATTTCTACATAGGAAGCAATGTGTACAGTAGATGCGAGGTGGTAGCTATGGAATGGGTGGTGCAGGAGGTGCTCAAGTTTCAGTGCTTTCTGCCTACCATCTACAATTTCTTGTGGTATTACCTAAAAGCAGCTAATGCTGATGCAGTCGTTGAGAAGAGGGTCAAGTATCTCGCAGTGCTGGCACTGTCAGGTCATGAGCAACTGTGCTACTGGCCTTCAACAGTTGCTGCAGCACTTGTAATCCTGGCTTGTCTTGAAGTCAATCAAATTTCATCCATCAAAATCATAGGGATCCACGTTAGATCAAAAGATGAGAATTTGTATGAATGCATAGAGGATAACAAGCCATTGGCTATACAATTCAGTTTGGTGACGATGGTTGCTAACCATCAGAAGACAAATGGCTTTCTTATACCTGGTTGA 1908 0.4748 MTTRSRKSKRKLEPEPPPFTITKKLRQRLPRRQRQNISPVLLISISGQNPRFSVDSSSGSDFAAGEASCNSSRASVAGKGNANSRNEFSIDSTRNRRFEKRNENEVEVSESSCVDSASFAGERSERSRSLILKFKRENKNPKENDDVSCAKSEITTILKFKSGSESKNLKENDDVSCAKSEITSEEQFNSKSSGNGNGNTKISSESNANDVVSFSSGVCASFHEENNRNKENTKNRASECEYSQGSRSLHAEENCADLIAQSMTKQESDIYDVVADLACSEDLRFSYCDDDESEYCSSQGTVFSEFHSEIFGECSQPELSDFSPSLFVDSGSQFSEGSVGETPSPTYLLFLQYRKEFTALVSASPVMNASSVVEDVVNFVRFEDSDDEDSYQMLRKRERRQGFVSNYSERYFSTTEFGDTVIEQRAQMVHWIVEQSYRRQLRQETVFLGVNLLDRFLSKGYFKAKRNLQIVGIACLTLATRIEENQQYNRVGQKNFYIGSNVYSRCEVVAMEWVVQEVLKFQCFLPTIYNFLWYYLKAANADAVVEKRVKYLAVLALSGHEQLCYWPSTVAAALVILACLEVNQISSIKIIGIHVRSKDENLYECIEDNKPLAIQFSLVTMVANHQKTNGFLIPG 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00273 635 MobiDBLite consensus disorder prediction 180 205 - -
Pumo8g00273 635 MobiDBLite consensus disorder prediction 1 17 - -
Pumo8g00273 635 Pfam Cyclin, C-terminal domain 526 627 IPR004367 -
Pumo8g00273 635 SUPERFAMILY Cyclin-like 384 522 IPR036915 -
Pumo8g00273 635 Gene3D - 518 623 - -
Pumo8g00273 635 ProSitePatterns Cyclins signature. 425 456 IPR006671 -
Pumo8g00273 635 SMART Cyclin_C_2 526 635 IPR004367 -
Pumo8g00273 635 MobiDBLite consensus disorder prediction 181 205 - -
Pumo8g00273 635 MobiDBLite consensus disorder prediction 1 38 - -
Pumo8g00273 635 SUPERFAMILY Cyclin-like 526 612 IPR036915 -
Pumo8g00273 635 PANTHER CYCLINS 316 607 IPR039361 -
Pumo8g00273 635 SMART cyclin_7 530 611 IPR013763 -
Pumo8g00273 635 SMART cyclin_7 430 517 IPR013763 -
Pumo8g00273 635 Gene3D - 419 517 - -
Pumo8g00273 635 Pfam Cyclin, N-terminal domain 420 522 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00273 Pumo-Chr8 8072182 8077019 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00273 389 584 Core Cell Cycle Gene Families AT5G11300 33.663 4.50e-22 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00273 K21777 - gmx:100817658 983.015