Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00259 ATGAAATCCTATGTGGGTTTTGTTTCTTGGCTTGTTGTGTTGCTGTTTTGTGTGGGGTTTGAGTGTGCATGGTGTCAGGATGATGCTGTTGTGATGAACACGCTCAAGAAGGCCATCAAAGAGCCCAATGATCTTGAATGGAATGACCCAGATGTGTGTAAATGGGCACACGTTCAGTGCAACAACATGAAGAGGGTGACTGCAATTCAGATTGGGGGACAGAGCCTGAATGGTTCTCTGCCAAAGGAACTGGGGCAGCTATCAGGGTTGACACGTTTTGAGTGCATGAGCAATGGTTTCACTGGGCCATTCCCTAACATGCCAAAGTCCCTTGAGGTTCTGCTCATCCACAACAACAATTTCAACTCCATGCCTGGTGATTTCTTCACTGGCATGACCAATTTGCAAGATGTGAGCATTGGCTACAACTCTTTCTCCAACTGGGAGATTCCTGTTAGCCTCAAGGACTGTGATGCTCTCAGGAGTTTCTCTGCAATCAATGCTGGCCTTGTGGGGAAAATCCCAGATTTTTTTGGCAAAGATGGTCCTTTCCCAGGTTTGGTTTCTCTTAGCTTGAGTTTTAATTCTCTTGAAGGAGGGTTGCCTGCAACCCTTTCTGGGAGTTCTATAGAGACCCTTTGGGTGAATGGTCAGAATAGTGATGGTAAACTCAATGGTACTCTTGATGTGTTAAAGAGCATGACATCTTTGAAACAAATTTGGGTACATGGTAACTCATTCACAGGTCCTATACCGGACTTGTCAAACCATGATCAACTGTTTGATGTGAGTTTGAGGGATAACCAGTTGACTGGGGTTGTTCCACCCTCTCTCACTGCTCTTCCTGCTCTTAAAGTTGTGAATTTGACCAATAACTTACTCCAAGGGTCTCCTCCCTTGTTCAAAGGTGGAGTGCGGGTTGATAATGATTTAGACAAGGGAACCAATAGTTTTTGCACAAAGGAAGCTGGTAAGCCATGTGCTCCCCTTGTGGATGATTTGCTGTCTGTTGTTGAACCTTTGGGGTATCCTCTTAGACTTGCTGAAAGTTGGAAGGGGAATGACCCTTGTGCTCAAAGATGGATGGGGATTGTTTGCTCAGATGGTAACGTTTCCATTATTAGCTTTCAGAGCATGAATCTCTCTGGAAACATTTCTCCAAGTTTTGCCAAGCTTACATATCTGACCAAGTTGCTTCTTGCCAACAATGGCCTCACTGGTACCATACCAAGTGAACTCGCCAGTATGCCTTTTTTGAAGGAGTTGGATGTTTCCAATAACAAATTGTATGGTAAGGTGCCGTCTTTCCGTGGGGATGTAGATCTCAAAACTGATGGGAATCCTGATATTGGAAAGGATACAGCTCCTGCCCCACCTGGCTCAAGTCCTGGGGGTAAATCTGGAGGTGAAGGTAAGAAACATAATACTGGAGCAATTGTTGGCACTGTGGTGGGGGGTGTCAGTTTACTTGGTATAGGGGCTCTGGTGTTTATGTATCGTAGAAAACATAAGCGTGCCAGCAAAGTTCAAAGTCCTACTGCAATAGTGATACATCCTCGTCATTCTGGAGATGGCAATGCTCTGAAGATAAGTGTTGCACCTGCAGGTGCAGATGCTGGTGCTAGTGGTGGGGGTAGTGCTGGAGGAACTGGTGCATTTAGTCCAACTAGTAGTGTTCAACATGTGGAAGCTGGTAATATGGTGATTTCAATCCAAGTTTTGAGGCAAGTTACAAACAATTTCAGTGAGGGAAACATACTGGGAAAAGGAGGTTTTGGTACTGTATACAAAGGAGAATTGCATGATGGAACAAAAATTGCAGTGAAAAGGATGGAATCTGGAATGATGGGTGGGAAGGGGCTGATTGAGTTTGAGTCTGAAATTGCAGTACTTACAAGAGTTCGACATAGGCATCTGGTTGCACTCGAAGGCCATTGCTTGGATGGAAATGAGAAGCTTCTTGTGTATGAATACATGCCTCAAGGTCCTCTTAGTAAGCATTTATTTGAATGGAAAGAGGAAGGGTTACAACCACTGGAATGGAAGAGAAGACTTTCCATTGCCTTGGATGTTGCTAGAGGAGTTGAGTACCTTCATGGTTTGGCCCAACAAATTTTCATCCACAGGGATCTAAAACCATCAAACATCTTGCTCGGGGATGATATGCGAGCCAAAGTGGCAGACTTTGGATTAGTTCGGCTTGCTCCGGAAGGAAAGACCTCATTTGAGACTAGGCTTGCTGGAACATTTGGATATTTGGCTCCAGAGTATGCAGTCACCGGACGAGTTACAACGAAGGTTGATGTATACAGCTATGGGGTGATTCTCATGGAGATGATAACAGGAAGGAGAGCAATTGACAACAGCCAACCAGAAGAGAATGTCCACCTTGTTACATGGTTCAGAAGGATGCTACTGAACAAAGACTCTTTTGGAAAGCTCATTGACCCCGCAATGGATGTTGATGAGGAGGCCTTACCGAGTTTTAGGACTGTGGCCGAGTTGGCTGGCCACTGCTGCGCGAGGGAGCCCTACCAGCGTCCTGACATGAGTCATGTAGTGAATGTGCTGGCACCTCTTGTCGAGATTTGGAAGCCTTCTGAAGCAGATGATGATGACATTTATGGGATTGATTTGGACATGACCTTACCTCAAGTACTCAGTAAGTGGCAGGCTTTTGAAGGAAAGAGCACCTATGATGTTTCATCCTCTTCATCAATGCTTACTAGTGGAGATAATACACAGTCTAGCATACCAACTAGGCCTTCTGGATTTGCTGATTCCTTTACTTCCACTGATGGAAGATGA 2808 0.4509 MKSYVGFVSWLVVLLFCVGFECAWCQDDAVVMNTLKKAIKEPNDLEWNDPDVCKWAHVQCNNMKRVTAIQIGGQSLNGSLPKELGQLSGLTRFECMSNGFTGPFPNMPKSLEVLLIHNNNFNSMPGDFFTGMTNLQDVSIGYNSFSNWEIPVSLKDCDALRSFSAINAGLVGKIPDFFGKDGPFPGLVSLSLSFNSLEGGLPATLSGSSIETLWVNGQNSDGKLNGTLDVLKSMTSLKQIWVHGNSFTGPIPDLSNHDQLFDVSLRDNQLTGVVPPSLTALPALKVVNLTNNLLQGSPPLFKGGVRVDNDLDKGTNSFCTKEAGKPCAPLVDDLLSVVEPLGYPLRLAESWKGNDPCAQRWMGIVCSDGNVSIISFQSMNLSGNISPSFAKLTYLTKLLLANNGLTGTIPSELASMPFLKELDVSNNKLYGKVPSFRGDVDLKTDGNPDIGKDTAPAPPGSSPGGKSGGEGKKHNTGAIVGTVVGGVSLLGIGALVFMYRRKHKRASKVQSPTAIVIHPRHSGDGNALKISVAPAGADAGASGGGSAGGTGAFSPTSSVQHVEAGNMVISIQVLRQVTNNFSEGNILGKGGFGTVYKGELHDGTKIAVKRMESGMMGGKGLIEFESEIAVLTRVRHRHLVALEGHCLDGNEKLLVYEYMPQGPLSKHLFEWKEEGLQPLEWKRRLSIALDVARGVEYLHGLAQQIFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKTSFETRLAGTFGYLAPEYAVTGRVTTKVDVYSYGVILMEMITGRRAIDNSQPEENVHLVTWFRRMLLNKDSFGKLIDPAMDVDEEALPSFRTVAELAGHCCAREPYQRPDMSHVVNVLAPLVEIWKPSEADDDDIYGIDLDMTLPQVLSKWQAFEGKSTYDVSSSSSMLTSGDNTQSSIPTRPSGFADSFTSTDGR 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00259 935 SUPERFAMILY Protein kinase-like (PK-like) 557 865 IPR011009 -
Pumo8g00259 935 MobiDBLite consensus disorder prediction 440 474 - -
Pumo8g00259 935 Pfam Protein kinase domain 582 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00259 935 ProSitePatterns Protein kinases ATP-binding region signature. 587 609 IPR017441 GO:0005524
Pumo8g00259 935 FunFam Leucine-rich repeat receptor-like kinase 329 453 - -
Pumo8g00259 935 ProSitePatterns Serine/Threonine protein kinases active-site signature. 706 718 IPR008271 GO:0004672|GO:0006468
Pumo8g00259 935 FunFam receptor protein kinase TMK1 545 658 - -
Pumo8g00259 935 CDD TM_EGFR-like 474 508 - -
Pumo8g00259 935 SMART serkin_6 581 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00259 935 Gene3D Ribonuclease Inhibitor 331 454 IPR032675 -
Pumo8g00259 935 FunFam receptor protein kinase TMK1 659 876 - -
Pumo8g00259 935 SUPERFAMILY L domain-like 45 434 - -
Pumo8g00259 935 Gene3D Transferase(Phosphotransferase) domain 1 659 875 - -
Pumo8g00259 935 MobiDBLite consensus disorder prediction 901 935 - -
Pumo8g00259 935 Pfam Leucine rich repeat N-terminal domain 26 61 IPR013210 -
Pumo8g00259 935 Pfam Leucine rich repeat N-terminal domain 348 367 IPR013210 -
Pumo8g00259 935 CDD STKc_IRAK 587 860 - -
Pumo8g00259 935 PANTHER OSJNBA0070M12.3 PROTEIN 11 935 - -
Pumo8g00259 935 Gene3D Phosphorylase Kinase; domain 1 551 658 - -
Pumo8g00259 935 Gene3D Ribonuclease Inhibitor 25 325 IPR032675 -
Pumo8g00259 935 FunFam Receptor-like kinase TMK4 26 324 - -
Pumo8g00259 935 ProSiteProfiles Protein kinase domain profile. 581 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00259 Pumo-Chr8 7467792 7472202 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00259 43 871 Receptor kinase-like Gene Family AT1G55610 28.664 2.58e-79 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pumo8g00259 Pkinase 3.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00259 K00924 - gmx:100776064 1613.2