Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00201 ATGGATCGTTCTGCTATGACTGTTGGGCCAGGAATGGATATGCCGATCATGCATGACAGTGACAGGTATGAGCTGGTCCGTGATATTGGGTCTGGGAATTTTGGGGTGGCAAGGCTCATGAGAGACAAGCACACTGAGGAGCTTGTTGCTGTCAAGTATATTGAGAGAGGTGATAAGATAGATGAAAATGTACGAAGGGAAATTATAAATCACAGATCACTGAGGCATCCCAATATTGTCAGGTTCAAGGAGATCATATTAACCCCTACACATTTGGCTATTGTGATGGAATACGCTTCTGGAGGAGAGTTATTTGAGCGGATATGCAATGCAACAGCAGGACGGTTTAGTGAAGATGAGGCACGCTTCTTCTTCCAACAACTTATATCAGGGGTTAGCTATTGTCATGCAATGCAAGTATGCCATCGTGACTTGAAGTTGGAGAACACATTGTTGGATGGTAGTCCAGCTCCTCGTTTGAAGATTTGTGATTTTGGGTATTCGAAGTCCTCTGTGCTACATTCACAACCAAAATCTACAGTCGGTACCCCTGCCTACATTGCTCCTGAAGTTTTGCTTAAGAAGGAATATGATGGCAAGATTGCAGATGTGTGGTCTTGTGGGGTGACCTTATATGTCATGTTGATGGGTGCATATCCTTTTGAGGATCCACAGGAACCTAAAAATTTCCAGAAGACAATTCATAGGATTTTGAAAGTCCAGTACTCAATTGCTGATTATGTTCATATATCTCCCGAGTGCTGTCATCTAATCTCAAGGATCTTTGTTGCAGACCCTGCCCAGAGAATAAGTATTCCCGAGATTCGAAACCACGAGTGGTTTTTGAAGAACCTTCCGGCCGATCTCATGGTCGAGAACACGATGAACAACCAGTTTGAGGAGCCTGATCAACCAATGCAGAGCATTGAAGAAATCATGCAGATAATCAGCGAGGCTACGATTCCTGCAGCCAGAACTCAGTCTCTCAACCAGTATCTTACAGGTAGCTTGGACATGGACGACGACATGGACGAGGACCCTGAGACCGATCCTGACCTTGAAATTGATAGCAGTGGAGAAATAGTTTATGCAATGTAA 1098 0.4417 MDRSAMTVGPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRDKHTEELVAVKYIERGDKIDENVRREIINHRSLRHPNIVRFKEIILTPTHLAIVMEYASGGELFERICNATAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLMGAYPFEDPQEPKNFQKTIHRILKVQYSIADYVHISPECCHLISRIFVADPAQRISIPEIRNHEWFLKNLPADLMVENTMNNQFEEPDQPMQSIEEIMQIISEATIPAARTQSLNQYLTGSLDMDDDMDEDPETDPDLEIDSSGEIVYAM 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00201 365 FunFam Serine/threonine-protein kinase SRK2E 99 289 - -
Pumo8g00201 365 FunFam Serine/threonine-protein kinase SRK2E 14 98 - -
Pumo8g00201 365 SUPERFAMILY Protein kinase-like (PK-like) 15 321 IPR011009 -
Pumo8g00201 365 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Pumo8g00201 365 Gene3D Transferase(Phosphotransferase) domain 1 99 289 - -
Pumo8g00201 365 Pfam Protein kinase domain 23 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00201 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Pumo8g00201 365 ProSiteProfiles Protein kinase domain profile. 23 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00201 365 SMART serkin_6 23 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00201 365 MobiDBLite consensus disorder prediction 338 355 - -
Pumo8g00201 365 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Pumo8g00201 365 MobiDBLite consensus disorder prediction 337 358 - -
Pumo8g00201 365 PANTHER SERINE/THREONINE KINASE 22 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00201 Pumo-Chr8 6321608 6325145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00201 22 285 CBL-interacting serine-threonine protein kinases AT5G25110 44.203 1.17e-67 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pumo8g00201 Pkinase 1.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00201 K14498 - gmx:100804702 680.633