Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00175 ATGATTTCAATTATAAAATACAAAAGAAACCACCTTGCTCCCCCAACACACCATTATTCTTCACTCCTCCTCTTCCTTCTCTCTTCCAACAAACACAGCTCCTCCACCATGGCAACAGCAGCATCTTCGGACACAACATCATCACAGCTTCCATTGAAACCAATCCCTGGCAGCTACGGTCTCCCATTCTTCGGAGCCATAAGCGACAGACACAACTACTTCTACCACCAGGGAAGGGACAAGTTCTTCGCCACCAGGATCCAACAGCACAACTCCACCGTGATCCGAACCAACATGCCTCCGGGACCCTTCATCTCCTCGGACCCACGTGTCGTCGCGCTATTGGACGGCGCCTCGTTCCCGATCCTCTTCGACAACCGCATGGTCGAGAAGCTAAACGTCCTCGACGGCACCTTCATGCCCTCCACCAAGTTCACCGGCGGGTTCCGCGTCTGCGCCTACCTCGACACCACCGAGCCCAACCACGCCCTCATCAAGCAGTTCTTCCTCAACGTCCTCGCCAAGCGAAAAGACACTTTTGTCCCTCTATTCCGGAACTGCCTCCAGGAGTCGTTCGCGGAGATCGAGGACCAGTTGAGTAAAAACGCCAAAGCGGACTTCAATACTGTCTTCAGTGACGCCTCCTTCAACTTCATGTTCAGGTTCTTCTGTGATGGCAAAGACCCTTCGCAGACCAGCCTTGGCTCTAAGGGACCAAAGCTCGTGGACACGTGGCTGCTCTTCCAGCTGGCCCCACTCGCAACCCTAGGCCTCCCAAAAATCTTCAACTACATCGAAGACTTCCTAATCCGCACGCTCCCCTTCCCCGCGTGCCTCACAAAGTCCGGCTACAAGAAGCTCTACGAGGCCTTCAAAACGCACGCAACGACAGCGCTCGACGAGGCCGAGAAACTCGGCCTCAAACGAAACGAGGCGTGCCACAACGTCGTTTTCACCGCGGGCTTCAACGCCTACGGAGGGTTAAAGAACCAGTTCCCCTACCTGCTCAAATGGGTGGGGTTAAGCGGCGAGAAGCTCCACGCGGACCTCGCGCGTGAGATAAGGCGCGTGGTGAACGACGAGGGCGGGGTCACGCTCTCCGCGCTGGAGAAAATGCCGCTCGTGAAGTCCGTGGTGTACGAGGTGATGCGCATCGAACCCGCGGTGCCGTACCAGTACGCGCGCGCGAGGGAGGACCTTGTCGTTCAGAGCCACGACGCGTCGTTTCAGGTGAAGAAGGGGGAGATGCTGTTCGGGTACCAGCCGTTTGCGACGAAGGATCCTAGGATCTTCGAGGATGCCGAGGTTTTCGTTCCGCGGAGGTTTGTCGGGGAAGGTGAGAAGTTGCTGAAGCACGTGCTTTGGTCGAACGGGAGGGAGACGGAGGAGCCTTCGGTGAGTAATAAACAGTGCCCCGGGAAGAATCTGGTGGTGCTGCTGTGCAGGTTGTTTCTGGTGGAGCTGTTTTTGCGTTACGATACGTTTGAGTTTGATTTTACGCAAGCTGGGTTTGGTCCTACTATTACCATTAAGTCCCTCACCAAGGCATCTACCTTCTGA 1560 0.5571 MISIIKYKRNHLAPPTHHYSSLLLFLLSSNKHSSSTMATAASSDTTSSQLPLKPIPGSYGLPFFGAISDRHNYFYHQGRDKFFATRIQQHNSTVIRTNMPPGPFISSDPRVVALLDGASFPILFDNRMVEKLNVLDGTFMPSTKFTGGFRVCAYLDTTEPNHALIKQFFLNVLAKRKDTFVPLFRNCLQESFAEIEDQLSKNAKADFNTVFSDASFNFMFRFFCDGKDPSQTSLGSKGPKLVDTWLLFQLAPLATLGLPKIFNYIEDFLIRTLPFPACLTKSGYKKLYEAFKTHATTALDEAEKLGLKRNEACHNVVFTAGFNAYGGLKNQFPYLLKWVGLSGEKLHADLAREIRRVVNDEGGVTLSALEKMPLVKSVVYEVMRIEPAVPYQYARAREDLVVQSHDASFQVKKGEMLFGYQPFATKDPRIFEDAEVFVPRRFVGEGEKLLKHVLWSNGRETEEPSVSNKQCPGKNLVVLLCRLFLVELFLRYDTFEFDFTQAGFGPTITIKSLTKASTF 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00175 519 Gene3D Cytochrome P450 46 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00175 519 Pfam Cytochrome P450 348 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00175 519 PRINTS E-class P450 group IV signature 425 443 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00175 519 PRINTS E-class P450 group IV signature 471 489 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00175 519 PRINTS E-class P450 group IV signature 372 388 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00175 519 SUPERFAMILY Cytochrome P450 49 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00175 519 FunFam Allene oxide synthase, chloroplastic 50 518 - -
Pumo8g00175 519 PANTHER CYTOCHROME P450 26 49 495 - -
Pumo8g00175 519 CDD CYP74 85 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00175 Pumo-Chr8 5877235 5882698 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00175 34 517 Cytochrome P450 AT5G42650 50.206 2.26e-171 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00175 K01723 - gmx:100801764 912.524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g00175 8 5877235 5882698 Pumo8g00175 8 5877235 5882698 ECH