Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00159 ATGAACACAAACAGGCAATTAGACAAGGCTATAATCTTGGACTTCTTTGGTGCTGGAGGCGAGCCATCTGCAACTAACATAAATTGGGCAATGGCAGAGATAATAAGGGATCCAAGAGTAATGAAGAAAGCACAAGCTGAGGTGAGAGATGTATTCAATATGAAAGGAAGGGTTGATGAAATTTGCATCAATGAACTCAAATATTTGAAATCAGTTGTCAAAGAGACCCTAAGGTTACACCCTCCAGGTCCTCTTTTACTTCCAAGAGAATGTGGACAGACATGTGAGATTGATGGGTATCATATACCAGTCAAGAGTAAGGTAATTGTGAATGCTTGGGCAATTGGAAGAGATCCAAACTATTGGGCTGAAGCACAGAGCTCTATTGACTACAAAGGGACTAATTTTAAGTACATTCCATTCGGTGCTGGAAGAAGAATATGCCCAGGCAGCACCTTTGGTTTAATAAATGTTGAGCTGGCACTTGCACTTTTGTTGTATCACTTTGATTGGATGCTTCCAAACGGAATGAAAAGTGAGGACTTGGACATGACTGAGAAATTTGGAGTGACTGTTAGAAGAAAAGATGACCTGTACTTGATACCTGTCATTTCTCGTCCTTTCCTGGGAACTGGTGTAGACTGCAGAGAGTAG 654 0.4113 MNTNRQLDKAIILDFFGAGGEPSATNINWAMAEIIRDPRVMKKAQAEVRDVFNMKGRVDEICINELKYLKSVVKETLRLHPPGPLLLPRECGQTCEIDGYHIPVKSKVIVNAWAIGRDPNYWAEAQSSIDYKGTNFKYIPFGAGRRICPGSTFGLINVELALALLLYHFDWMLPNGMKSEDLDMTEKFGVTVRRKDDLYLIPVISRPFLGTGVDCRE 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00159 217 PRINTS P450 superfamily signature 148 159 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00159 217 PRINTS P450 superfamily signature 139 148 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00159 217 PRINTS P450 superfamily signature 71 82 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00159 217 PRINTS P450 superfamily signature 18 35 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00159 217 Gene3D Cytochrome P450 4 201 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00159 217 Pfam Cytochrome P450 10 191 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00159 217 PANTHER OS08G0105600 PROTEIN 4 205 - -
Pumo8g00159 217 SUPERFAMILY Cytochrome P450 9 202 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00159 217 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 141 150 IPR017972 GO:0005506|GO:0016705
Pumo8g00159 217 PRINTS E-class P450 group I signature 138 148 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00159 217 PRINTS E-class P450 group I signature 27 53 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00159 217 PRINTS E-class P450 group I signature 70 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00159 217 PRINTS E-class P450 group I signature 7 24 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00159 217 PRINTS E-class P450 group I signature 148 171 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00159 217 FunFam Predicted protein 16 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00159 Pumo-Chr8 4973031 4974755 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00159 1 206 Cytochrome P450 AT2G45570 47.442 5.47e-66 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00159 - - gmx:100814157 345.125