Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00146 ATGCCTGATTTATTAGCCCTTATCACTTTTTTGCTCATCTTAATTGTGTCACTGAAAATTGTGAGGAATCTTAAGAGAGAATCAACACCAAATATACCTCCAGGACCATGGAAGTTACCTATTATAGGAAGTATACATCATATACTTACATCTACACCACATCAAAAATTGAGAGACCTGGCCAAAATATATGGACCTTTGATGCATCTCCAACTTGGGGGGGTGACAACAATCATTGTTTCCTCACCCGAGTCTGCTAGGGAGATAATGAAAACCCATGATGTCATCTTTGCATCAAGGCCTCGTAGTGTAACTTCAGATATATTGTCCTATGAATCCAAAGGTATTGCTTCTGCACCTTATGGAAATTATTATAAAGTGATACGAAAGATGTGCACAATGGAGCTTTTAGGCCAAAAACGTGTCAATTCATTCCAGCCAATAAGAGAAGAAGAGCTCACCAATCTCATCAAAATGATTGGTTTGCAGAAAGGATCAGCCATTAACCTCACTCAACTAGTACTTTCATCAATATATTCTATCATTTCAAGAGCTGCTTTTGGCAAGAAATGCAAAGACGAAGAAGAATTCATATCACTGGTGAAAGAAGGACTTGCAATATTAGGAGATTTATTTCCTTCTGGTAGATGGCTTCAACTTGTCACCGGTTTCAGGCCTAAGCTTGAGAGGTTGCATCGACAAATTGATCGGATTCTAGAAAACATCATCTTTGAACATAAAGAGGCAGAGTCAAAAGACAAAGAAGAAGGCCAAGGTGGAGAAAATGAAGATTTGCTCGATATTCTCCTAAAACTCCAGGATGGTAATGATAGTAACGAAAATATTTGTTTAACTAATAACAATATCAAGGCTACAATCCAGGAAATCTTTAGTGCTGGAGGTGAGCCATCAGCAATTACCATAGATTGGGCAATGGCTGAGATGGTAAGGGATCAAAGAGTGATGAAGAAAGCACAAGCTGAAGTGAGAAATGTATTCAATATGAAAGGAAGGGTTGATGAAATTTGCATCAATGAACTCAAATATTTGAAATCAGTTGTCAAAGAGACCCTAAGATTACACCCTCCAGGTCCTCTCTTACTTCCAAGAGAATGTAATCAAGCATGTAAGATTCATGGGTATGACATACCGATCAAAAGCAGGGTCATAGTCAATGCTTGGGCTATTGGAAGAGATCCAAACTACTGGACTGAACCAGATAGATTTTATCCAGAGAGATTCATTAATAGCTCTTTTGACTACAAAGGGAGTAACTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGCCCAGGCAGCACATTTGGTTTGATAAATGTTGAGCTGGCACTTGCATTGTTGTTGTATCACTTTGATTGGAAGCTTCCCAATGGAATGAAATTTGAGGACTTGGACTTGACTGAGGAATTTAGAGTGACTATTAGAAGAAAAGATGATTTGTACTTGATTCCTGTAGCTTCTCCTTCTTTGGTTACAATGTAA 1506 0.3825 MPDLLALITFLLILIVSLKIVRNLKRESTPNIPPGPWKLPIIGSIHHILTSTPHQKLRDLAKIYGPLMHLQLGGVTTIIVSSPESAREIMKTHDVIFASRPRSVTSDILSYESKGIASAPYGNYYKVIRKMCTMELLGQKRVNSFQPIREEELTNLIKMIGLQKGSAINLTQLVLSSIYSIISRAAFGKKCKDEEEFISLVKEGLAILGDLFPSGRWLQLVTGFRPKLERLHRQIDRILENIIFEHKEAESKDKEEGQGGENEDLLDILLKLQDGNDSNENICLTNNNIKATIQEIFSAGGEPSAITIDWAMAEMVRDQRVMKKAQAEVRNVFNMKGRVDEICINELKYLKSVVKETLRLHPPGPLLLPRECNQACKIHGYDIPIKSRVIVNAWAIGRDPNYWTEPDRFYPERFINSSFDYKGSNFEYIPFGAGRRICPGSTFGLINVELALALLLYHFDWKLPNGMKFEDLDLTEEFRVTIRRKDDLYLIPVASPSLVTM 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00146 501 FunFam Cytochrome P450 71D8 25 492 - -
Pumo8g00146 501 SUPERFAMILY Cytochrome P450 33 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00146 501 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00146 501 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00146 501 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00146 501 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00146 501 Gene3D Cytochrome P450 25 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00146 501 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00146 501 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00146 501 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00146 501 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00146 501 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00146 501 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00146 501 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00146 501 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00146 501 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00146 501 Pfam Cytochrome P450 33 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00146 501 CDD CYP71-like 64 488 - -
Pumo8g00146 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Pumo8g00146 501 PANTHER OS08G0105600 PROTEIN 56 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00146 Pumo-Chr8 3456192 3460691 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00146 7 493 Cytochrome P450 AT3G26300 41.884 9.18e-132 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00146 - - gmx:100818520 772.696