Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00143 ATGCCTGGTTTATTAGCCCTCGTCACTGTTTTGCTCATCTTAATTGTGTCCCTAAAAATTGTGAGGAATCTTAAGAAAAGAGAATCAACACCAAATATACCTCCAGGACCATGGAAGTTACCTATTATAGGAAGCATACATCATATACTTACATCTACACCACATCAAAAATTGAGAGACCTGGCCAAAATATATGGACCTTTGATGCATCTCCAACTTGGAGAGATGAATGCAATCATTGTTTCCTCAGCAGAGTATGCTAAGGAGATAATGAAAACCCATGATGTCATCTTTGCATCAAGGCCTCACAGTGTAGCTTCAAATATTATATCCTATGAATCCACAGGTATTGCTACTGCACCTTATGGAAATTATTGGAGACTGTTACGAAAGATGTGCACAATAGAGCTTTTCTCACAAAAGCGTGTCAATTCTTTCCAACCAATAAGAGAAGAAGAGCTCACCAATCTCATCAAAATGATTGATTCACAGGAAGGATCACCCATCAATCTCACTGAAGCAGTTTCAGGCGTAAGCTCGAGAATGGATTGGATTCTAGAAAACATTATCATTGAACATAAAGAGGCAAAGTCAAGAGCTAAGGAAGGCCAAGCTGAACAAAAGGATGAAGATTTGGTAGATATTCTCCTTAAATTTCAGGATGGTGATGATAGTAACAAGGATATTTGTTTAACTAATAACAATATCAAGGCTATAATCCTGGAAATCTTTGGTGCTGGAGGTGAGACATCAACAACTACCATAGACTGGGCAATGGCTGAGATGATAAGGGATCAAAGAGTGATGAAGAAAGCACAAGCTGAAGTGAGAAACGTATTCAATATAAAAGGAAAAGTTGATGAATCTTGCATCAATGAACTCAAATATTTGAAATCTGTTGTCAAAGAGACCCTAAGGTTACACCCACCAGTACCTCTTTTAGTTCCTAGAGAATGTGGACAAACATGTGAGATTCATGGGTATCACATACCCATCAAAAGTAAAGTCTTTGTGAATGCTTGGGCGATTGGAAGAGATCCAAAGTACTGGACTGAAGCTGAGAGGTTTTATCCAGAGAGATTCATTGATAGCTCTATTGACTACAAAGGGATTAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGCCCAGGCAGCACATTTGGTTTGATAAATGTTGAGCTGGCACTTGCATTGTTCTTGTATCACTTTGATTGGAAGCTTCCAAATGGAATGAAAAGTGAGGACTTGGACATGACTGAGCAATTTGGAGTGACTGTTGGAAGAAAAAATGACCTATACTTAATTCCTATCACGTGTTCTCCTTTACTTGCAATGTAA 1347 0.3831 MPGLLALVTVLLILIVSLKIVRNLKKRESTPNIPPGPWKLPIIGSIHHILTSTPHQKLRDLAKIYGPLMHLQLGEMNAIIVSSAEYAKEIMKTHDVIFASRPHSVASNIISYESTGIATAPYGNYWRLLRKMCTIELFSQKRVNSFQPIREEELTNLIKMIDSQEGSPINLTEAVSGVSSRMDWILENIIIEHKEAKSRAKEGQAEQKDEDLVDILLKFQDGDDSNKDICLTNNNIKAIILEIFGAGGETSTTTIDWAMAEMIRDQRVMKKAQAEVRNVFNIKGKVDESCINELKYLKSVVKETLRLHPPVPLLVPRECGQTCEIHGYHIPIKSKVFVNAWAIGRDPKYWTEAERFYPERFIDSSIDYKGINFEYIPFGAGRRICPGSTFGLINVELALALFLYHFDWKLPNGMKSEDLDMTEQFGVTVGRKNDLYLIPITCSPLLAM 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00143 448 Coils Coil 186 206 - -
Pumo8g00143 448 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 378 387 IPR017972 GO:0005506|GO:0016705
Pumo8g00143 448 Gene3D Cytochrome P450 178 433 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00143 448 PANTHER OS08G0105600 PROTEIN 178 442 - -
Pumo8g00143 448 CDD CYP71-like 65 435 - -
Pumo8g00143 448 Pfam Cytochrome P450 34 176 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00143 448 Pfam Cytochrome P450 185 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00143 448 FunFam Os06g0641600 protein 148 438 - -
Pumo8g00143 448 PRINTS E-class P450 group I signature 298 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00143 448 PRINTS E-class P450 group I signature 385 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00143 448 PRINTS E-class P450 group I signature 375 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00143 448 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00143 448 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00143 448 PRINTS E-class P450 group I signature 339 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00143 448 Gene3D Cytochrome P450 26 177 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00143 448 PRINTS P450 superfamily signature 376 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00143 448 PRINTS P450 superfamily signature 246 263 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00143 448 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00143 448 PRINTS P450 superfamily signature 299 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00143 448 SUPERFAMILY Cytochrome P450 34 439 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00143 Pumo-Chr8 3336989 3338586 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00143 25 440 Cytochrome P450 AT3G26320 39.241 1.56e-116 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00143 - - gmx:102665189 650.203