Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00139 ATGCATCTACAACTTGGGGAGGTCTTCACAGTCATTGTTTCCTCAGCAGAGTATGCTAAGGAGATAATGAAAACCCATGATGTCATCTTTGCATCAAGGCCTCACATTCTAGCTGCAGATATACTGTCCTATGAATCCACAAACATTATTGGAGCACCTTATGGAAATTATTGGAGACAGCTGCGAAAAATATGCACAGTGGAGCTTCTCACCCAGAAACGTGTCAATTCATTCAAGCCAATAAGAGAAGAAGAGCTCACCAATCTCATCAAAATGATTGATTCACATAAAGGGTCTCCAATCAACCTCTCTGAAGCAGTACTTTTATCAATATATAATATCATTTCAAGAGCTGCATTTGGCATGAAATGCAAAGACCAAGAAGAATTCATATCAGTGGTAAAAGAAGCAATACCACTTGCAGGAGGTTTTAACATAGGAGATTTGTTTCCTTCTGCTAAATGGCTTCAACTTGTTACTGGTTTGAGGCCTAAGATTGAGAAGCTGCATCGACAAATTGATCGGATACTATTAGACATCATCAATGAACACAGAGAGGCAAAGTCAAAAGCCAAAGAGAGCCAAGAAGGTGAAGCAGCGGAAGATTTGGTAGATGTTCTCCTAAAATTCCAGGATGGTAATGATAGCAAACAGGACATTTGCTTAACTATTAACAATATCAAGGCTATAATCCTGGACATATTTGGTGCTGGAGGTGAGACAGCAGCAACTGCCATAAATTGGGCAATGGCAGAGATGATTAGGGATCCAAGAGTATTGAAGAAAGCACAAGCTGAAGTGAGAGAGGTATACAATATGAAAGGAATGGTTGATGAAATTTGCATTGATGAACTCAAATATTTGAAATTAGTTGTCAAAGAGACCCTAAGGCTACACCCTCCAGCTCCTCTTCTAATTCCAAGAGAAAGTGGACAAGCATGTGAGATTGGTGGGTATCATATACCAGTCAAAAGTATGGTCATAGTGAATGCTTGGGCAATTGGAAGAGATCCAAACTACTGGACTGAACCAGAGAGGTTTTATCCAGAGAGATTCATTGATAGCTCTATTGACTACAAAGGGGGTAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGCCCAGGCAGCACATTTGGTTTGAAAAATGTTGAGCTGGCACTTGCATTTTTGTTGTTTCACTTTGATTGGAAGCTTCCAAATGGAATGAAAAATGAGGACCTGGACATGACTGAGCAATTTGGAGTGACTGTTACAAGAAAAGCTGACCTATTCTTGATACCTGTCACTTCTCGTCCTATCCTGCTCACGCACACAGAAGCACAAAGGAGAGGGAGGGAGAGAATTCTATCAAGCTAA 1365 0.4029 MHLQLGEVFTVIVSSAEYAKEIMKTHDVIFASRPHILAADILSYESTNIIGAPYGNYWRQLRKICTVELLTQKRVNSFKPIREEELTNLIKMIDSHKGSPINLSEAVLLSIYNIISRAAFGMKCKDQEEFISVVKEAIPLAGGFNIGDLFPSAKWLQLVTGLRPKIEKLHRQIDRILLDIINEHREAKSKAKESQEGEAAEDLVDVLLKFQDGNDSKQDICLTINNIKAIILDIFGAGGETAATAINWAMAEMIRDPRVLKKAQAEVREVYNMKGMVDEICIDELKYLKLVVKETLRLHPPAPLLIPRESGQACEIGGYHIPVKSMVIVNAWAIGRDPNYWTEPERFYPERFIDSSIDYKGGNFEYIPFGAGRRICPGSTFGLKNVELALAFLLFHFDWKLPNGMKNEDLDMTEQFGVTVTRKADLFLIPVTSRPILLTHTEAQRRGRERILSS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00139 454 SUPERFAMILY Cytochrome P450 2 430 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00139 454 PRINTS E-class P450 group I signature 330 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00139 454 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00139 454 PRINTS E-class P450 group I signature 226 243 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00139 454 PRINTS E-class P450 group I signature 376 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00139 454 PRINTS E-class P450 group I signature 366 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00139 454 PRINTS E-class P450 group I signature 110 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00139 454 PRINTS E-class P450 group I signature 246 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00139 454 PRINTS E-class P450 group I signature 289 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00139 454 PRINTS P450 superfamily signature 290 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00139 454 PRINTS P450 superfamily signature 237 254 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00139 454 PRINTS P450 superfamily signature 367 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00139 454 CDD CYP71-like 1 426 - -
Pumo8g00139 454 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 369 378 IPR017972 GO:0005506|GO:0016705
Pumo8g00139 454 Gene3D Cytochrome P450 1 435 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00139 454 PANTHER OS08G0105600 PROTEIN 1 434 - -
Pumo8g00139 454 FunFam Cytochrome P450 99A2 1 431 - -
Pumo8g00139 454 Pfam Cytochrome P450 3 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00139 Pumo-Chr8 3212345 3216603 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00139 1 434 Cytochrome P450 AT3G26310 41.480 2.59e-124 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00139 - - gmx:102665189 743.036