Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00131 ATGGGTAGTTGTGGAAGGGAAGGTGTAGTGAGGCAGTATATAAGATCAAAGGTTCCTCGTTTAAGATGGACCCCTGAACTTCATCGTTGCTTTGTTTATGCCATTGAGACTCTTGGAGGTCATCATAAGGCCACTCCTAAGCTTGTTCTTCAATTGATGGATGTTAAAGGGCTCACTATTTCACACGTCAAGAGCCATCTGCAGATGTACAGAAGCATGAAAGGTGACTCCTGCAGACAAGATAGGACTTCTACCCAACATAGAAAACAATCTTTTCAGAAGCATGATGATGGATGTGTTGATGAAGTGAGTGATGTTGGTTTTCACTCTTGCTTAAAATCCATTAGAAAAGAATCTGATTCCCTCTCCAGCTGCAAGCTAGAATCGAGAAGACAAGTTTACTCTCAGGAATCCTACAATGCAGCCAAAGAATATGTGAAGGCAGTTCCAAATCCATACACTACTTTTTATGATTACCTGCGGAGCATGGCTGAGCAGAAGGGAATAAAGAAGATTTGTGTTGGTTCAATATGGCAGACTCAACCCCTTTCCACAACCTTTCCTATGCTGCCAAAGCAAGAATCAGATTTGCTCCAGGTTGCCAAATTAAATGAAAAACAGCCTTTGAATGAAGTTGGGAACAATTATTGGAGGGTAGGAGCAGAGGATGAAGACATAGGAGGTTGTGAGTTGTCATTGTCAATCTCATTGCCACAACCCCATCCTTCCTCTCAGAAAAGTAATGCTTCTTCAGTCAGTGAGACCAGTGAGGCCTTTTCATTATGCCCCGAGTTTAGCAACTACACGGGCTGTTCAAGCTCTTCCACTGTCCCAAACACAATTAATTTGGACCTTTCTTTGGCCATTTGA 870 0.4253 MGSCGREGVVRQYIRSKVPRLRWTPELHRCFVYAIETLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSMKGDSCRQDRTSTQHRKQSFQKHDDGCVDEVSDVGFHSCLKSIRKESDSLSSCKLESRRQVYSQESYNAAKEYVKAVPNPYTTFYDYLRSMAEQKGIKKICVGSIWQTQPLSTTFPMLPKQESDLLQVAKLNEKQPLNEVGNNYWRVGAEDEDIGGCELSLSISLPQPHPSSQKSNASSVSETSEAFSLCPEFSNYTGCSSSSTVPNTINLDLSLAI 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00131 289 SUPERFAMILY Homeodomain-like 17 73 IPR009057 -
Pumo8g00131 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Pumo8g00131 289 FunFam Myb family transcription factor 17 75 - -
Pumo8g00131 289 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Pumo8g00131 289 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 73 IPR006447 GO:0003677
Pumo8g00131 289 Gene3D - 18 75 - -
Pumo8g00131 289 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 15 138 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00131 Pumo-Chr8 3035348 3040109 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00131 1 71 G2-like Transcription Factor Family AT1G14600 73.684 1.97e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pumo8g00131 Myb_DNA-binding 1.5e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00131 - - gmx:100810994 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g00131 8 3035348 3040109 Pumo8g00131 8 3035348 3040109 ECH