Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00104 ATGTCACCAGAAAATCCTCTATCGTTACTTACCCAAAATTTGAAACATATTTGCTTCAACCTAGCTACCATGGCCATGTTTGTGTATTTTGGAGTGTTTGTTTCCATTCTCTCCTTCATCATATTCTGTGAGACCATCCGGAGACACAATAATAATAGAGATGCACCTATTACAAGTTGGCCAATCATTGGTATGCTACCTTCAATTCTACAAAATCTGTCCAATATCCACGATTATGCAACCGAGCTTTTGAAAAATCATGGAGGCACCCTAATGTTTGATGGACCTTGGTTCACAAACACCAGCTTTATTCTCACCAGCGATCCCATGAACGTGAACCACATCACAAGCAAGAATTTTGGCAACTATGGGAAAGGGTCCCACTTCAATGAGATTTTTGAAGTTTTAGGAGGAGGGATTTTCAATGCTGATTTTCATGTATGGAAACAAGAGAGGACAATGCTTCTTTCATTGCTTAAGAGGGAAAGCTATAAGATTTTCCTTCAACAAACCATTCAGAAGAAGCTGGAGAATTGCTTAATACCATTTCTAGATCATGCATCCAAAGCTGGAGCTGAGGTGGACTTGCAAGATGCCTTTCAGAGGTTCACCTTTGACACTGTCTGCTCCATGGCTTTTGGATATGATCCTAATTGCCTTCCAGATAAGGTCACTAAGCTCTCACACTTTGCTTATGTGAAAGCTTTGATTGTGATGGAGGATGTTGCATTCCACAGGCACATCACACCAAGGTGTTTGTGGAAGCTGCAGCAATGGCTCCAAATTGGTCAAGAGAAGAAGTTCAAGGAGGCCAAGGAAAACTTTGAGAAATTCTTGCATGAACGAATTGCATGCAAACGTGAAGAGCAAAGTAGATGGAATAACACCGAGAAAGAGGATGATGACACTCATTCTGACCTGCTAAGAGTGCTGATGGAAGAAGGAGCTGAAAAGGGGCAAATAATGGATGACAAGTATCTTAGAGACACTGCATTTACCCTTGTTGCTGGTGGAAGTGGCACTGTTAGTGCAAGTTTCAGTTGGTTCTTTTGGCTAGTTTCAACTCATCCAGATGTGGAAGCTAAAATTATAAAAGAGATCAAAGATAACTGTATAAATGAAGATGGAAATTTGATTGCTTCAAGTGTGGAAGAGTTTGGTAAGCTAGTTTACCTCCATGGAGCAATATGTGAAACCTTGAGGCTTTATCCTTCTATTCCCTTTGACCACAAGTGTGCAATCAAATCTGATGTACTCCCTAGTGGACACCATGTAAGTCCAAATACTATGATATTATACTCTTTGTACTCAATGGGAAGGATGGAACAAATATGGGGTGATGACTGTTTGGAATTTAAGCCTGAGAGATGGATTTCAGAGAAAGGAAGCATCATACCCATTCCATCTTTCAAGTTCATAGCTTTCAATGCAGGACCCAGAAGTTGTTTGGGTAAAGACATTACTTTTACTGAAATGAAGATGGCTGCAGTTGCTATACTATGGAGGTTTCACATGCAAGTGGTGGATGGTCATCCTATAACCCCAAGGCTTTCTATTGTGATTAACATGGAACGTGGCTTGAAGGTTAAAATTACTGAAAGATGCACTTGA 1611 0.4041 MSPENPLSLLTQNLKHICFNLATMAMFVYFGVFVSILSFIIFCETIRRHNNNRDAPITSWPIIGMLPSILQNLSNIHDYATELLKNHGGTLMFDGPWFTNTSFILTSDPMNVNHITSKNFGNYGKGSHFNEIFEVLGGGIFNADFHVWKQERTMLLSLLKRESYKIFLQQTIQKKLENCLIPFLDHASKAGAEVDLQDAFQRFTFDTVCSMAFGYDPNCLPDKVTKLSHFAYVKALIVMEDVAFHRHITPRCLWKLQQWLQIGQEKKFKEAKENFEKFLHERIACKREEQSRWNNTEKEDDDTHSDLLRVLMEEGAEKGQIMDDKYLRDTAFTLVAGGSGTVSASFSWFFWLVSTHPDVEAKIIKEIKDNCINEDGNLIASSVEEFGKLVYLHGAICETLRLYPSIPFDHKCAIKSDVLPSGHHVSPNTMILYSLYSMGRMEQIWGDDCLEFKPERWISEKGSIIPIPSFKFIAFNAGPRSCLGKDITFTEMKMAAVAILWRFHMQVVDGHPITPRLSIVINMERGLKVKITERCT 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00104 536 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00104 536 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00104 536 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00104 536 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00104 536 PRINTS E-class P450 group I signature 393 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00104 536 PANTHER CYTOCHROME P450 41 528 - -
Pumo8g00104 536 Gene3D Cytochrome P450 45 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00104 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 475 484 IPR017972 GO:0005506|GO:0016705
Pumo8g00104 536 PRINTS P450 superfamily signature 482 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00104 536 PRINTS P450 superfamily signature 394 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00104 536 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00104 536 PRINTS P450 superfamily signature 473 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00104 536 Pfam Cytochrome P450 58 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g00104 536 CDD CYP86A 92 527 - -
Pumo8g00104 536 SUPERFAMILY Cytochrome P450 57 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00104 Pumo-Chr8 2427901 2429846 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00104 24 535 Cytochrome P450 AT4G39490 42.286 1.33e-151 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00104 - - gmx:100791312 878.626