Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00096 ATGACAGAATCAAACGCAATTGCAAATGGTTTGGCTGGTGCAGGTGGTGGAATTATTGCTCAAATCATAACTTATCCTCTTCAAACGGTAAACACACGACAGCAAACTGAGAGAACACTCAAGAGGAACAAGCAAAGTTTATCTTCCAATTCAACCACTGCTCCTGGCACTCTTCTTCAGATCTTTCAGGTCATTGGAACTGAGGGTTGGGGTGGACTCTATAGTGGTCTCAAGCCTTCTCTTCTTGGAACTGCTGCTTCTCAGGGCATTTACTACTATTTCTATCAAGTTTTTAAGAACAAGGCAGTGGCCATTGCAGCTGCGCGGAAAGTGAAAGGGCGTGGAGATGGTACTGTTGGAATGTTTGGTTGGCTTGTTGTGGCTGCCATTGCCGGGTCCTTGAATGTGTTGTTCACAAACCCAATATGGGTTTTGGTGACTCGGATGCAGACTCATACTCAAGCAGAAAGGAAAATCATGGAGGAAAAGAAAGAAGCTTTAAGGAGGGCTGCTTCTGAAAGCACCATAGCAGACTCAACATTACCAGACAAATTGGCTGAACTGAATTCTATAAAACCTCGGCCATATGGAACTATACATGCAGCTAATGAAGTCTACAATGAAGCGGGTATAGTTGGATTTTGGAAGGGTGTCATCCCTGCCCTTATTATGGTATGCAATCCATCAATTCAGTTTATGATTTATGAGAGCTCATTAAAGCATCTAAGAGCAAAACGCGCTGCTAAGAAGAAAGGGGATACAAGTATATCTGCTTGGGAGGTCTTTTTGGTGGGAGCAATAGCAAAACTTGGAGCTACTGTCTCAACATATCCATTACTAGTTGTCAAGTCAAGGCTTCAAGCAAAACAGGAGATTGGTGGAAGTAGCTCATATAGATACTCAGGTACTTTTGATGCGGTACTTAAAATGATCCGTTATGAAGGGTTACCTGGCTTTTATAAGGGGATGAGCACAAAGATAGTGCAAAGTGTTTTTGCAGCTTCTGTTCTGTTCATGGTTAAGGAGGAGCTTGTTAAGGCTTTTATGGTTCTGGCAGATAAGAGCAAAAAAGTTGTATCAAATATAAGTAGTTGA 1095 0.4219 MTESNAIANGLAGAGGGIIAQIITYPLQTVNTRQQTERTLKRNKQSLSSNSTTAPGTLLQIFQVIGTEGWGGLYSGLKPSLLGTAASQGIYYYFYQVFKNKAVAIAAARKVKGRGDGTVGMFGWLVVAAIAGSLNVLFTNPIWVLVTRMQTHTQAERKIMEEKKEALRRAASESTIADSTLPDKLAELNSIKPRPYGTIHAANEVYNEAGIVGFWKGVIPALIMVCNPSIQFMIYESSLKHLRAKRAAKKKGDTSISAWEVFLVGAIAKLGATVSTYPLLVVKSRLQAKQEIGGSSSYRYSGTFDAVLKMIRYEGLPGFYKGMSTKIVQSVFAASVLFMVKEELVKAFMVLADKSKKVVSNISS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00096 364 ProSiteProfiles Solute carrier (Solcar) repeat profile. 119 241 IPR018108 -
Pumo8g00096 364 Gene3D Mitochondrial carrier domain 186 363 IPR023395 -
Pumo8g00096 364 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 101 IPR018108 -
Pumo8g00096 364 ProSiteProfiles Solute carrier (Solcar) repeat profile. 256 347 IPR018108 -
Pumo8g00096 364 Gene3D Mitochondrial carrier domain 2 170 IPR023395 -
Pumo8g00096 364 SUPERFAMILY Mitochondrial carrier 6 343 IPR023395 -
Pumo8g00096 364 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 5 352 IPR044712 GO:0006862|GO:0055085
Pumo8g00096 364 Pfam Mitochondrial carrier protein 119 243 IPR018108 -
Pumo8g00096 364 Pfam Mitochondrial carrier protein 255 349 IPR018108 -
Pumo8g00096 364 Pfam Mitochondrial carrier protein 5 100 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00096 Pumo-Chr8 2357177 2362366 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00096 26 350 Chloroplast and Mitochondria Gene Families AT2G47490 29.483 1.13e-28 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00096 K13354 - gmx:100775304 634.795